Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.08■□□□□ 0.48
LRRC40Q9H9A6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.08■□□□□ 0.48
LRRC40Q9H9A6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
LRRC40Q9H9A6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.08■□□□□ 0.48
LRRC40Q9H9A6 SPDYE13P-201ENST00000445314 798 ntBASIC18.08■□□□□ 0.48
LRRC40Q9H9A6 AL671277.2-201ENST00000458060 996 ntBASIC18.08■□□□□ 0.48
LRRC40Q9H9A6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC40Q9H9A6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.08■□□□□ 0.48
LRRC40Q9H9A6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.08■□□□□ 0.48
LRRC40Q9H9A6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.08■□□□□ 0.48
LRRC40Q9H9A6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC40Q9H9A6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC40Q9H9A6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC40Q9H9A6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC40Q9H9A6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.08■□□□□ 0.48
LRRC40Q9H9A6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
LRRC40Q9H9A6 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC40Q9H9A6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC40Q9H9A6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.08■□□□□ 0.48
LRRC40Q9H9A6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRC40Q9H9A6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
LRRC40Q9H9A6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
LRRC40Q9H9A6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
LRRC40Q9H9A6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 LINC00304-203ENST00000565008 1864 ntBASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 Z83836.1-201ENST00000624605 1642 ntBASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRC40Q9H9A6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 AC139713.2-201ENST00000641328 2723 ntBASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 MTCL1P1-201ENST00000446207 792 ntBASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 AC068472.1-201ENST00000474589 881 ntBASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 RNF126P1-202ENST00000569893 925 ntBASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 LINC01451-201ENST00000623792 534 ntBASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 AL645608.8-201ENST00000606034 2086 ntBASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 SIRPAP1-201ENST00000448467 1770 ntBASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LRRC40Q9H9A6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.05■□□□□ 0.48
LRRC40Q9H9A6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.05■□□□□ 0.48
LRRC40Q9H9A6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC40Q9H9A6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC40Q9H9A6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LRRC40Q9H9A6 HLA-J-201ENST00000462773 1622 ntBASIC18.05■□□□□ 0.48
LRRC40Q9H9A6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.05■□□□□ 0.48
LRRC40Q9H9A6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC40Q9H9A6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms