Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC94Q9BW85 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC94Q9BW85 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC94Q9BW85 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CCDC94Q9BW85 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC94Q9BW85 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC94Q9BW85 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CCDC94Q9BW85 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC94Q9BW85 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC94Q9BW85 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC94Q9BW85 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC94Q9BW85 FAM86EP-206ENST00000510506 987 ntBASIC20.18■□□□□ 0.82
CCDC94Q9BW85 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC94Q9BW85 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CCDC94Q9BW85 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC94Q9BW85 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC94Q9BW85 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC94Q9BW85 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC94Q9BW85 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC94Q9BW85 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.17■□□□□ 0.82
CCDC94Q9BW85 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CCDC94Q9BW85 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.17■□□□□ 0.82
CCDC94Q9BW85 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC94Q9BW85 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC94Q9BW85 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC94Q9BW85 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC94Q9BW85 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC94Q9BW85 UBALD1-205ENST00000590891 2641 ntBASIC20.17■□□□□ 0.82
CCDC94Q9BW85 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC94Q9BW85 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC94Q9BW85 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC94Q9BW85 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC94Q9BW85 HBZP1-201ENST00000354915 429 ntBASIC20.17■□□□□ 0.82
CCDC94Q9BW85 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC94Q9BW85 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
CCDC94Q9BW85 AC092597.1-201ENST00000487352 616 ntBASIC20.17■□□□□ 0.82
CCDC94Q9BW85 VENTXP5-201ENST00000523979 775 ntBASIC20.17■□□□□ 0.82
CCDC94Q9BW85 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC94Q9BW85 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC94Q9BW85 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CCDC94Q9BW85 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC94Q9BW85 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC94Q9BW85 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC94Q9BW85 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 PCED1CP-201ENST00000419887 785 ntBASIC20.16■□□□□ 0.82
CCDC94Q9BW85 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 AL136038.3-201ENST00000561909 1096 ntBASIC20.16■□□□□ 0.82
CCDC94Q9BW85 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 MIR3180-4-201ENST00000582223 153 ntBASIC20.16■□□□□ 0.82
CCDC94Q9BW85 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 AP000550.4-202ENST00000639755 178 ntBASIC20.16■□□□□ 0.82
CCDC94Q9BW85 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC94Q9BW85 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC94Q9BW85 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC94Q9BW85 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC94Q9BW85 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC94Q9BW85 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.15■□□□□ 0.82
CCDC94Q9BW85 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.15■□□□□ 0.82
CCDC94Q9BW85 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.15■□□□□ 0.82
CCDC94Q9BW85 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CCDC94Q9BW85 AC005332.1-201ENST00000577698 1310 ntBASIC20.15■□□□□ 0.82
CCDC94Q9BW85 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC94Q9BW85 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC94Q9BW85 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CCDC94Q9BW85 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CCDC94Q9BW85 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC94Q9BW85 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC94Q9BW85 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC94Q9BW85 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC94Q9BW85 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC94Q9BW85 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC94Q9BW85 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
CCDC94Q9BW85 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms