Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 AP000867.3-201ENST00000524675 377 ntBASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 AC012313.10-201ENST00000623509 926 ntBASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 KRT89P-201ENST00000620027 1478 ntBASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCGF1Q9BSM1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 DUSP5P1-201ENST00000441325 1139 ntBASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 KRT126P-201ENST00000549467 1181 ntBASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 MIR3180-1-201ENST00000580374 94 ntBASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 MIR3180-3-201ENST00000584616 94 ntBASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 AC004263.2-201ENST00000617183 678 ntBASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 AC124864.1-201ENST00000623408 392 ntBASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.93□□□□□ -0.02
PCGF1Q9BSM1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 TOB2P1-201ENST00000469761 992 ntBASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms