Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC38A3Q99624 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC38A3Q99624 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC38A3Q99624 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SLC38A3Q99624 AC093677.2-201ENST00000600169 1863 ntBASIC17.22■□□□□ 0.35
SLC38A3Q99624 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.22■□□□□ 0.35
SLC38A3Q99624 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SLC38A3Q99624 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC38A3Q99624 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SLC38A3Q99624 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC38A3Q99624 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC38A3Q99624 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC38A3Q99624 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC38A3Q99624 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SLC38A3Q99624 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC38A3Q99624 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC38A3Q99624 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
SLC38A3Q99624 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SLC38A3Q99624 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC38A3Q99624 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SLC38A3Q99624 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC38A3Q99624 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC38A3Q99624 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC38A3Q99624 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SLC38A3Q99624 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC38A3Q99624 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SLC38A3Q99624 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC38A3Q99624 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SLC38A3Q99624 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.22■□□□□ 0.35
SLC38A3Q99624 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC38A3Q99624 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC38A3Q99624 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.22■□□□□ 0.35
SLC38A3Q99624 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLC38A3Q99624 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC38A3Q99624 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
SLC38A3Q99624 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC38A3Q99624 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC38A3Q99624 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC38A3Q99624 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC38A3Q99624 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC38A3Q99624 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
SLC38A3Q99624 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC38A3Q99624 AC135776.1-201ENST00000319817 2481 ntBASIC17.21■□□□□ 0.35
SLC38A3Q99624 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SLC38A3Q99624 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC38A3Q99624 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC38A3Q99624 AC018712.1-201ENST00000455767 687 ntBASIC17.21■□□□□ 0.35
SLC38A3Q99624 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC38A3Q99624 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC38A3Q99624 RNA5SP419-201ENST00000515908 135 ntBASIC17.21■□□□□ 0.35
SLC38A3Q99624 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.21■□□□□ 0.35
SLC38A3Q99624 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC38A3Q99624 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC38A3Q99624 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.21■□□□□ 0.35
SLC38A3Q99624 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.21■□□□□ 0.35
SLC38A3Q99624 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC38A3Q99624 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
SLC38A3Q99624 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
SLC38A3Q99624 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SLC38A3Q99624 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SLC38A3Q99624 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
SLC38A3Q99624 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SLC38A3Q99624 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SLC38A3Q99624 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
SLC38A3Q99624 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.21■□□□□ 0.34
SLC38A3Q99624 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC38A3Q99624 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC38A3Q99624 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC38A3Q99624 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.2■□□□□ 0.34
SLC38A3Q99624 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC38A3Q99624 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC38A3Q99624 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC38A3Q99624 AC010460.3-201ENST00000511359 1579 ntBASIC17.2■□□□□ 0.34
SLC38A3Q99624 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC38A3Q99624 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC38A3Q99624 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SLC38A3Q99624 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC38A3Q99624 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC38A3Q99624 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC38A3Q99624 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.2■□□□□ 0.34
SLC38A3Q99624 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC38A3Q99624 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
SLC38A3Q99624 AL139288.1-201ENST00000623748 933 ntBASIC17.2■□□□□ 0.34
SLC38A3Q99624 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SLC38A3Q99624 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC38A3Q99624 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.2■□□□□ 0.34
SLC38A3Q99624 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.2■□□□□ 0.34
SLC38A3Q99624 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC38A3Q99624 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SLC38A3Q99624 IL9RP2-201ENST00000423948 1312 ntBASIC17.2■□□□□ 0.34
SLC38A3Q99624 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.2■□□□□ 0.34
SLC38A3Q99624 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC38A3Q99624 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC38A3Q99624 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC38A3Q99624 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.19■□□□□ 0.34
SLC38A3Q99624 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SLC38A3Q99624 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC38A3Q99624 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC38A3Q99624 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SLC38A3Q99624 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms