Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SPENQ96T58 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.92■□□□□ 0.14
SPENQ96T58 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.92■□□□□ 0.14
SPENQ96T58 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.92■□□□□ 0.14
SPENQ96T58 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SPENQ96T58 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SPENQ96T58 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SPENQ96T58 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
SPENQ96T58 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SPENQ96T58 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.92■□□□□ 0.14
SPENQ96T58 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.92■□□□□ 0.14
SPENQ96T58 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.92■□□□□ 0.14
SPENQ96T58 Z92544.3-201ENST00000624747 417 ntBASIC15.92■□□□□ 0.14
SPENQ96T58 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SPENQ96T58 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SPENQ96T58 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.92■□□□□ 0.14
SPENQ96T58 AC135776.1-201ENST00000319817 2481 ntBASIC15.92■□□□□ 0.14
SPENQ96T58 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SPENQ96T58 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SPENQ96T58 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SPENQ96T58 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.92■□□□□ 0.14
SPENQ96T58 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SPENQ96T58 AC002472.2-201ENST00000442739 958 ntBASIC15.92■□□□□ 0.14
SPENQ96T58 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.92■□□□□ 0.14
SPENQ96T58 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.92■□□□□ 0.14
SPENQ96T58 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.92■□□□□ 0.14
SPENQ96T58 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.92■□□□□ 0.14
SPENQ96T58 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SPENQ96T58 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SPENQ96T58 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SPENQ96T58 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.92■□□□□ 0.14
SPENQ96T58 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPENQ96T58 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.91■□□□□ 0.14
SPENQ96T58 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SPENQ96T58 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
SPENQ96T58 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPENQ96T58 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPENQ96T58 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPENQ96T58 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPENQ96T58 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.91■□□□□ 0.14
SPENQ96T58 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPENQ96T58 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPENQ96T58 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SPENQ96T58 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SPENQ96T58 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.91■□□□□ 0.14
SPENQ96T58 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.91■□□□□ 0.14
SPENQ96T58 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.91■□□□□ 0.14
SPENQ96T58 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPENQ96T58 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SPENQ96T58 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SPENQ96T58 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPENQ96T58 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.91■□□□□ 0.14
SPENQ96T58 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPENQ96T58 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SPENQ96T58 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPENQ96T58 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SPENQ96T58 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.91■□□□□ 0.14
SPENQ96T58 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.91■□□□□ 0.14
SPENQ96T58 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.91■□□□□ 0.14
SPENQ96T58 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SPENQ96T58 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.91■□□□□ 0.14
SPENQ96T58 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.91■□□□□ 0.14
SPENQ96T58 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.9■□□□□ 0.14
SPENQ96T58 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPENQ96T58 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SPENQ96T58 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
SPENQ96T58 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
SPENQ96T58 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.9■□□□□ 0.14
SPENQ96T58 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.9■□□□□ 0.14
SPENQ96T58 AC190387.1-201ENST00000551683 408 ntBASIC15.9■□□□□ 0.14
SPENQ96T58 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.9■□□□□ 0.14
SPENQ96T58 AC105339.1-204ENST00000636249 355 ntBASIC15.9■□□□□ 0.14
SPENQ96T58 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
SPENQ96T58 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPENQ96T58 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.9■□□□□ 0.14
SPENQ96T58 AL353593.2-201ENST00000602529 1483 ntBASIC15.9■□□□□ 0.14
SPENQ96T58 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.9■□□□□ 0.14
SPENQ96T58 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.9■□□□□ 0.14
SPENQ96T58 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPENQ96T58 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPENQ96T58 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SPENQ96T58 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SPENQ96T58 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SPENQ96T58 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
SPENQ96T58 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPENQ96T58 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.89■□□□□ 0.13
SPENQ96T58 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SPENQ96T58 MIR4751-201ENST00000578027 74 ntBASIC15.89■□□□□ 0.13
SPENQ96T58 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SPENQ96T58 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPENQ96T58 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPENQ96T58 BCAR1-209ENST00000546196 1340 ntBASIC15.89■□□□□ 0.13
SPENQ96T58 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SPENQ96T58 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.89■□□□□ 0.13
SPENQ96T58 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SPENQ96T58 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
SPENQ96T58 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.89■□□□□ 0.13
SPENQ96T58 AC008687.5-201ENST00000593746 558 ntBASIC15.89■□□□□ 0.13
SPENQ96T58 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.89■□□□□ 0.13
SPENQ96T58 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms