Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.05■□□□□ -0
CSMD1Q96PZ7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.04■□□□□ -0
CSMD1Q96PZ7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CSMD1Q96PZ7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.04■□□□□ -0
CSMD1Q96PZ7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.04■□□□□ -0
CSMD1Q96PZ7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.04■□□□□ -0
CSMD1Q96PZ7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.04■□□□□ -0
CSMD1Q96PZ7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.04■□□□□ -0
CSMD1Q96PZ7 AC010336.2-201ENST00000564226 506 ntBASIC15.04■□□□□ -0
CSMD1Q96PZ7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.04■□□□□ -0
CSMD1Q96PZ7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CSMD1Q96PZ7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.04■□□□□ -0
CSMD1Q96PZ7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC15.04■□□□□ -0
CSMD1Q96PZ7 AC025580.3-201ENST00000617932 1424 ntBASIC15.04■□□□□ -0
CSMD1Q96PZ7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CSMD1Q96PZ7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CSMD1Q96PZ7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CSMD1Q96PZ7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CSMD1Q96PZ7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.04■□□□□ -0
CSMD1Q96PZ7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.04■□□□□ -0
CSMD1Q96PZ7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.04■□□□□ -0
CSMD1Q96PZ7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.04■□□□□ -0
CSMD1Q96PZ7 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CSMD1Q96PZ7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CSMD1Q96PZ7 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
CSMD1Q96PZ7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.04■□□□□ -0
CSMD1Q96PZ7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.04■□□□□ -0
CSMD1Q96PZ7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.04■□□□□ -0
CSMD1Q96PZ7 AC007967.3-201ENST00000434308 558 ntBASIC15.04■□□□□ -0
CSMD1Q96PZ7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.04■□□□□ -0
CSMD1Q96PZ7 AD001527.2-201ENST00000622994 785 ntBASIC15.04■□□□□ -0
CSMD1Q96PZ7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CSMD1Q96PZ7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CSMD1Q96PZ7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CSMD1Q96PZ7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CSMD1Q96PZ7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CSMD1Q96PZ7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CSMD1Q96PZ7 AC092919.2-201ENST00000623631 1645 ntBASIC15.04■□□□□ -0
CSMD1Q96PZ7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CSMD1Q96PZ7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.04■□□□□ -0
CSMD1Q96PZ7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CSMD1Q96PZ7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.04■□□□□ -0
CSMD1Q96PZ7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.04■□□□□ -0
CSMD1Q96PZ7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CSMD1Q96PZ7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CSMD1Q96PZ7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.04■□□□□ -0
CSMD1Q96PZ7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CSMD1Q96PZ7 CRYGEP-201ENST00000412192 528 ntBASIC15.04■□□□□ -0
CSMD1Q96PZ7 SLC25A6P5-201ENST00000435663 894 ntBASIC15.04■□□□□ -0
CSMD1Q96PZ7 U91328.1-201ENST00000437528 223 ntBASIC15.04■□□□□ -0
CSMD1Q96PZ7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.04■□□□□ -0
CSMD1Q96PZ7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.04■□□□□ -0
CSMD1Q96PZ7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSMD1Q96PZ7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.03■□□□□ -0
CSMD1Q96PZ7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CSMD1Q96PZ7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CSMD1Q96PZ7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSMD1Q96PZ7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSMD1Q96PZ7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.03■□□□□ -0
CSMD1Q96PZ7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSMD1Q96PZ7 MIR943-201ENST00000401286 94 ntBASIC15.03■□□□□ -0
CSMD1Q96PZ7 AC004945.1-201ENST00000416738 983 ntBASIC15.03■□□□□ -0
CSMD1Q96PZ7 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.03■□□□□ -0
CSMD1Q96PZ7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.03■□□□□ -0
CSMD1Q96PZ7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.03■□□□□ -0
CSMD1Q96PZ7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.03■□□□□ -0
CSMD1Q96PZ7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.03■□□□□ -0
CSMD1Q96PZ7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSMD1Q96PZ7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSMD1Q96PZ7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.03■□□□□ -0
CSMD1Q96PZ7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CSMD1Q96PZ7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.03■□□□□ -0
CSMD1Q96PZ7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.03■□□□□ -0
CSMD1Q96PZ7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.03■□□□□ -0
CSMD1Q96PZ7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSMD1Q96PZ7 AL024508.2-201ENST00000607749 1894 ntBASIC15.03■□□□□ -0
CSMD1Q96PZ7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.03■□□□□ -0
CSMD1Q96PZ7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.03■□□□□ -0
CSMD1Q96PZ7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.03■□□□□ -0
CSMD1Q96PZ7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CSMD1Q96PZ7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CSMD1Q96PZ7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.03■□□□□ -0
CSMD1Q96PZ7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.03■□□□□ -0
CSMD1Q96PZ7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.03■□□□□ -0
CSMD1Q96PZ7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.03■□□□□ -0
CSMD1Q96PZ7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.03■□□□□ -0
CSMD1Q96PZ7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CSMD1Q96PZ7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.03■□□□□ -0
CSMD1Q96PZ7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CSMD1Q96PZ7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.02■□□□□ -0
CSMD1Q96PZ7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.02■□□□□ -0
CSMD1Q96PZ7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CSMD1Q96PZ7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.02■□□□□ -0
CSMD1Q96PZ7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.02■□□□□ -0
CSMD1Q96PZ7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CSMD1Q96PZ7 FO538757.1-201ENST00000623083 1397 ntBASIC15.02■□□□□ -0
CSMD1Q96PZ7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CSMD1Q96PZ7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSMD1Q96PZ7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CSMD1Q96PZ7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms