Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 AC091812.2-201ENST00000619081 385 ntBASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 AC116562.4-201ENST00000641316 2276 ntBASIC16.96■□□□□ 0.31
CNTNAP3BQ96NU0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CNTNAP3BQ96NU0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.96■□□□□ 0.3
CNTNAP3BQ96NU0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
CNTNAP3BQ96NU0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
CNTNAP3BQ96NU0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.96■□□□□ 0.3
CNTNAP3BQ96NU0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.96■□□□□ 0.3
CNTNAP3BQ96NU0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CNTNAP3BQ96NU0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 AC104417.2-201ENST00000562989 1793 ntBASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 AC108073.2-201ENST00000464002 357 ntBASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 AL662799.1-202ENST00000614205 422 ntBASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 AL022326.1-202ENST00000641533 845 ntBASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3BQ96NU0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 TNXA-203ENST00000507684 2038 ntBASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 AC004408.2-201ENST00000623613 2777 ntBASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 HILS1-202ENST00000545329 423 ntBASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 AC068587.10-201ENST00000641210 219 ntBASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 BCAR1-209ENST00000546196 1340 ntBASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CNTNAP3BQ96NU0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CNTNAP3BQ96NU0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms