Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM47Q96LD4 AC004832.2-201ENST00000426397 482 ntBASIC20.78■□□□□ 0.92
TRIM47Q96LD4 DNAJB3-202ENST00000449667 1266 ntBASIC20.78■□□□□ 0.92
TRIM47Q96LD4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.78■□□□□ 0.92
TRIM47Q96LD4 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.78■□□□□ 0.92
TRIM47Q96LD4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.78■□□□□ 0.92
TRIM47Q96LD4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM47Q96LD4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM47Q96LD4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.78■□□□□ 0.92
TRIM47Q96LD4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM47Q96LD4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM47Q96LD4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM47Q96LD4 BCL2-203ENST00000589955 5011 ntBASIC20.78■□□□□ 0.92
TRIM47Q96LD4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TRIM47Q96LD4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM47Q96LD4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM47Q96LD4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
TRIM47Q96LD4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM47Q96LD4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.77■□□□□ 0.92
TRIM47Q96LD4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM47Q96LD4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM47Q96LD4 AC126763.1-201ENST00000552015 2118 ntBASIC20.77■□□□□ 0.92
TRIM47Q96LD4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.77■□□□□ 0.92
TRIM47Q96LD4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM47Q96LD4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM47Q96LD4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM47Q96LD4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM47Q96LD4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.77■□□□□ 0.92
TRIM47Q96LD4 UNC93B6-202ENST00000528242 690 ntBASIC20.77■□□□□ 0.92
TRIM47Q96LD4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM47Q96LD4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.77■□□□□ 0.92
TRIM47Q96LD4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.77■□□□□ 0.92
TRIM47Q96LD4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.77■□□□□ 0.92
TRIM47Q96LD4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.77■□□□□ 0.92
TRIM47Q96LD4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TRIM47Q96LD4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.77■□□□□ 0.92
TRIM47Q96LD4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.77■□□□□ 0.92
TRIM47Q96LD4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM47Q96LD4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM47Q96LD4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM47Q96LD4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM47Q96LD4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM47Q96LD4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM47Q96LD4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.77■□□□□ 0.91
TRIM47Q96LD4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRIM47Q96LD4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
TRIM47Q96LD4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.77■□□□□ 0.91
TRIM47Q96LD4 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.77■□□□□ 0.91
TRIM47Q96LD4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
TRIM47Q96LD4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRIM47Q96LD4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRIM47Q96LD4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRIM47Q96LD4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM47Q96LD4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.76■□□□□ 0.91
TRIM47Q96LD4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM47Q96LD4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM47Q96LD4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM47Q96LD4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
TRIM47Q96LD4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM47Q96LD4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM47Q96LD4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRIM47Q96LD4 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.76■□□□□ 0.91
TRIM47Q96LD4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.76■□□□□ 0.91
TRIM47Q96LD4 AC007967.2-201ENST00000432613 625 ntBASIC20.76■□□□□ 0.91
TRIM47Q96LD4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.76■□□□□ 0.91
TRIM47Q96LD4 RNA5SP416-201ENST00000516838 111 ntBASIC20.76■□□□□ 0.91
TRIM47Q96LD4 KRT18P41-201ENST00000518924 1277 ntBASIC20.76■□□□□ 0.91
TRIM47Q96LD4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.76■□□□□ 0.91
TRIM47Q96LD4 MTMR9LP-203ENST00000426597 1545 ntBASIC20.76■□□□□ 0.91
TRIM47Q96LD4 AL390961.4-201ENST00000623958 2535 ntBASIC20.76■□□□□ 0.91
TRIM47Q96LD4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM47Q96LD4 AC125634.1-201ENST00000438758 1403 ntBASIC20.76■□□□□ 0.91
TRIM47Q96LD4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TRIM47Q96LD4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM47Q96LD4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TRIM47Q96LD4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM47Q96LD4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.76■□□□□ 0.91
TRIM47Q96LD4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TRIM47Q96LD4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.75■□□□□ 0.91
TRIM47Q96LD4 AP002414.3-201ENST00000589352 1468 ntBASIC20.75■□□□□ 0.91
TRIM47Q96LD4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM47Q96LD4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TRIM47Q96LD4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM47Q96LD4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TRIM47Q96LD4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM47Q96LD4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
TRIM47Q96LD4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM47Q96LD4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM47Q96LD4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM47Q96LD4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM47Q96LD4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM47Q96LD4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM47Q96LD4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM47Q96LD4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.75■□□□□ 0.91
TRIM47Q96LD4 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM47Q96LD4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM47Q96LD4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.75■□□□□ 0.91
TRIM47Q96LD4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.75■□□□□ 0.91
TRIM47Q96LD4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM47Q96LD4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms