Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.77■□□□□ 0.44
ECHDC3Q96DC8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.77■□□□□ 0.44
ECHDC3Q96DC8 AP005117.1-201ENST00000584346 1413 ntBASIC17.77■□□□□ 0.44
ECHDC3Q96DC8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
ECHDC3Q96DC8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.77■□□□□ 0.43
ECHDC3Q96DC8 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.77■□□□□ 0.43
ECHDC3Q96DC8 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.77■□□□□ 0.43
ECHDC3Q96DC8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ECHDC3Q96DC8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 AL353593.2-201ENST00000602529 1483 ntBASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 PMPCAP1-201ENST00000508114 1576 ntBASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 AL121894.2-201ENST00000602977 491 ntBASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 AL355877.3-201ENST00000622820 899 ntBASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.76■□□□□ 0.43
ECHDC3Q96DC8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 REXO1L11P-201ENST00000620964 1927 ntBASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 AC104692.2-201ENST00000603054 253 ntBASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ECHDC3Q96DC8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ECHDC3Q96DC8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ECHDC3Q96DC8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ECHDC3Q96DC8 SIRPAP1-201ENST00000448467 1770 ntBASIC17.74■□□□□ 0.43
ECHDC3Q96DC8 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ECHDC3Q96DC8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ECHDC3Q96DC8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.74■□□□□ 0.43
ECHDC3Q96DC8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ECHDC3Q96DC8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ECHDC3Q96DC8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ECHDC3Q96DC8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
ECHDC3Q96DC8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ECHDC3Q96DC8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ECHDC3Q96DC8 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.74■□□□□ 0.43
ECHDC3Q96DC8 AC079781.3-201ENST00000449110 356 ntBASIC17.74■□□□□ 0.43
ECHDC3Q96DC8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.74■□□□□ 0.43
ECHDC3Q96DC8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
ECHDC3Q96DC8 AL121912.1-201ENST00000603683 238 ntBASIC17.74■□□□□ 0.43
ECHDC3Q96DC8 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ECHDC3Q96DC8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ECHDC3Q96DC8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ECHDC3Q96DC8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ECHDC3Q96DC8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ECHDC3Q96DC8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.73■□□□□ 0.43
ECHDC3Q96DC8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms