Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.47■□□□□ 0.23
CTHRC1Q96CG8 AC019129.2-201ENST00000609837 1235 ntBASIC16.47■□□□□ 0.23
CTHRC1Q96CG8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.47■□□□□ 0.23
CTHRC1Q96CG8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CTHRC1Q96CG8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTHRC1Q96CG8 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.47■□□□□ 0.23
CTHRC1Q96CG8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.47■□□□□ 0.23
CTHRC1Q96CG8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTHRC1Q96CG8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTHRC1Q96CG8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTHRC1Q96CG8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.46■□□□□ 0.23
CTHRC1Q96CG8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
CTHRC1Q96CG8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTHRC1Q96CG8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTHRC1Q96CG8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.46■□□□□ 0.23
CTHRC1Q96CG8 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTHRC1Q96CG8 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTHRC1Q96CG8 MINOS1P3-201ENST00000457048 203 ntBASIC16.46■□□□□ 0.23
CTHRC1Q96CG8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTHRC1Q96CG8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.46■□□□□ 0.23
CTHRC1Q96CG8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTHRC1Q96CG8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.46■□□□□ 0.23
CTHRC1Q96CG8 INTS4P1-201ENST00000438455 1935 ntBASIC16.46■□□□□ 0.23
CTHRC1Q96CG8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CTHRC1Q96CG8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTHRC1Q96CG8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTHRC1Q96CG8 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.46■□□□□ 0.23
CTHRC1Q96CG8 AL049757.1-201ENST00000616842 1596 ntBASIC16.46■□□□□ 0.23
CTHRC1Q96CG8 AL138688.1-201ENST00000624851 1594 ntBASIC16.46■□□□□ 0.23
CTHRC1Q96CG8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CTHRC1Q96CG8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTHRC1Q96CG8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.46■□□□□ 0.23
CTHRC1Q96CG8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTHRC1Q96CG8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CTHRC1Q96CG8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.22
CTHRC1Q96CG8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
CTHRC1Q96CG8 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTHRC1Q96CG8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTHRC1Q96CG8 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.45■□□□□ 0.22
CTHRC1Q96CG8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTHRC1Q96CG8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTHRC1Q96CG8 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.45■□□□□ 0.22
CTHRC1Q96CG8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTHRC1Q96CG8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTHRC1Q96CG8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTHRC1Q96CG8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTHRC1Q96CG8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTHRC1Q96CG8 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.45■□□□□ 0.22
CTHRC1Q96CG8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.45■□□□□ 0.22
CTHRC1Q96CG8 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.45■□□□□ 0.22
CTHRC1Q96CG8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.45■□□□□ 0.22
CTHRC1Q96CG8 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.45■□□□□ 0.22
CTHRC1Q96CG8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.45■□□□□ 0.22
CTHRC1Q96CG8 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.45■□□□□ 0.22
CTHRC1Q96CG8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTHRC1Q96CG8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CTHRC1Q96CG8 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.45■□□□□ 0.22
CTHRC1Q96CG8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CTHRC1Q96CG8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.45■□□□□ 0.22
CTHRC1Q96CG8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTHRC1Q96CG8 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTHRC1Q96CG8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 RCN1P2-201ENST00000398357 915 ntBASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 AC114341.1-201ENST00000618070 349 ntBASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CTHRC1Q96CG8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTHRC1Q96CG8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTHRC1Q96CG8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTHRC1Q96CG8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTHRC1Q96CG8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CTHRC1Q96CG8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTHRC1Q96CG8 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CTHRC1Q96CG8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CTHRC1Q96CG8 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms