Protein–RNA interactions for Protein: Q96B67

ARRDC3, Arrestin domain-containing protein 3, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3Q96B67 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARRDC3Q96B67 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARRDC3Q96B67 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.7■□□□□ 0.42
ARRDC3Q96B67 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.7■□□□□ 0.42
ARRDC3Q96B67 AC139887.3-201ENST00000568585 713 ntBASIC17.7■□□□□ 0.42
ARRDC3Q96B67 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ARRDC3Q96B67 AC116407.3-201ENST00000623905 1129 ntBASIC17.7■□□□□ 0.42
ARRDC3Q96B67 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.7■□□□□ 0.42
ARRDC3Q96B67 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARRDC3Q96B67 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.7■□□□□ 0.42
ARRDC3Q96B67 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARRDC3Q96B67 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.7■□□□□ 0.42
ARRDC3Q96B67 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ARRDC3Q96B67 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
ARRDC3Q96B67 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ARRDC3Q96B67 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
ARRDC3Q96B67 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ARRDC3Q96B67 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ARRDC3Q96B67 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 AL022326.1-202ENST00000641533 845 ntBASIC17.69■□□□□ 0.42
ARRDC3Q96B67 AF228730.7-201ENST00000641842 219 ntBASIC17.69■□□□□ 0.42
ARRDC3Q96B67 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 SIGLEC16-201ENST00000599858 1437 ntBASIC17.69■□□□□ 0.42
ARRDC3Q96B67 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARRDC3Q96B67 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.68■□□□□ 0.42
ARRDC3Q96B67 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.68■□□□□ 0.42
ARRDC3Q96B67 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
ARRDC3Q96B67 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.68■□□□□ 0.42
ARRDC3Q96B67 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ARRDC3Q96B67 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ARRDC3Q96B67 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ARRDC3Q96B67 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.68■□□□□ 0.42
ARRDC3Q96B67 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ARRDC3Q96B67 RPS2P28-201ENST00000314255 741 ntBASIC17.68■□□□□ 0.42
ARRDC3Q96B67 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
ARRDC3Q96B67 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
ARRDC3Q96B67 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.68■□□□□ 0.42
ARRDC3Q96B67 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.68■□□□□ 0.42
ARRDC3Q96B67 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.68■□□□□ 0.42
ARRDC3Q96B67 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.68■□□□□ 0.42
ARRDC3Q96B67 AL671883.3-201ENST00000603274 991 ntBASIC17.68■□□□□ 0.42
ARRDC3Q96B67 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ARRDC3Q96B67 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ARRDC3Q96B67 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.68■□□□□ 0.42
ARRDC3Q96B67 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ARRDC3Q96B67 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ARRDC3Q96B67 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
ARRDC3Q96B67 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARRDC3Q96B67 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARRDC3Q96B67 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.67■□□□□ 0.42
ARRDC3Q96B67 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.67■□□□□ 0.42
ARRDC3Q96B67 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARRDC3Q96B67 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARRDC3Q96B67 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARRDC3Q96B67 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.67■□□□□ 0.42
ARRDC3Q96B67 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms