Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 AC125634.1-201ENST00000438758 1403 ntBASIC15.98■□□□□ 0.15
CPNE4Q96A23 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.98■□□□□ 0.15
CPNE4Q96A23 AC091607.1-201ENST00000490318 1060 ntBASIC15.98■□□□□ 0.15
CPNE4Q96A23 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.98■□□□□ 0.15
CPNE4Q96A23 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.98■□□□□ 0.15
CPNE4Q96A23 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.98■□□□□ 0.15
CPNE4Q96A23 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.98■□□□□ 0.15
CPNE4Q96A23 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.98■□□□□ 0.15
CPNE4Q96A23 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE4Q96A23 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE4Q96A23 AL138831.2-201ENST00000606564 490 ntBASIC15.98■□□□□ 0.15
CPNE4Q96A23 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.98■□□□□ 0.15
CPNE4Q96A23 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE4Q96A23 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.98■□□□□ 0.15
CPNE4Q96A23 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE4Q96A23 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CPNE4Q96A23 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE4Q96A23 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE4Q96A23 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.98■□□□□ 0.15
CPNE4Q96A23 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.98■□□□□ 0.15
CPNE4Q96A23 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.98■□□□□ 0.15
CPNE4Q96A23 KRT18P55-202ENST00000578578 1546 ntBASIC15.98■□□□□ 0.15
CPNE4Q96A23 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
CPNE4Q96A23 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE4Q96A23 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CPNE4Q96A23 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE4Q96A23 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE4Q96A23 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CPNE4Q96A23 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE4Q96A23 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.97■□□□□ 0.15
CPNE4Q96A23 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE4Q96A23 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE4Q96A23 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE4Q96A23 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE4Q96A23 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE4Q96A23 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CPNE4Q96A23 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE4Q96A23 AC097374.2-201ENST00000618617 1306 ntBASIC15.97■□□□□ 0.15
CPNE4Q96A23 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE4Q96A23 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE4Q96A23 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.97■□□□□ 0.15
CPNE4Q96A23 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE4Q96A23 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CPNE4Q96A23 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
CPNE4Q96A23 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.97■□□□□ 0.15
CPNE4Q96A23 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CPNE4Q96A23 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE4Q96A23 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE4Q96A23 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE4Q96A23 AL121772.3-201ENST00000610840 674 ntBASIC15.97■□□□□ 0.15
CPNE4Q96A23 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE4Q96A23 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE4Q96A23 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.97■□□□□ 0.15
CPNE4Q96A23 AL356309.3-201ENST00000624132 1934 ntBASIC15.97■□□□□ 0.15
CPNE4Q96A23 AC011270.2-201ENST00000624293 2550 ntBASIC15.97■□□□□ 0.15
CPNE4Q96A23 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE4Q96A23 KRT8P47-201ENST00000604727 1398 ntBASIC15.97■□□□□ 0.15
CPNE4Q96A23 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE4Q96A23 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CPNE4Q96A23 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.97■□□□□ 0.15
CPNE4Q96A23 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.97■□□□□ 0.15
CPNE4Q96A23 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CPNE4Q96A23 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE4Q96A23 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE4Q96A23 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE4Q96A23 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.96■□□□□ 0.15
CPNE4Q96A23 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE4Q96A23 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE4Q96A23 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE4Q96A23 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.96■□□□□ 0.15
CPNE4Q96A23 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.96■□□□□ 0.15
CPNE4Q96A23 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
CPNE4Q96A23 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.96■□□□□ 0.15
CPNE4Q96A23 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE4Q96A23 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.96■□□□□ 0.15
CPNE4Q96A23 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.96■□□□□ 0.15
CPNE4Q96A23 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE4Q96A23 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
CPNE4Q96A23 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE4Q96A23 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE4Q96A23 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE4Q96A23 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE4Q96A23 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE4Q96A23 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE4Q96A23 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE4Q96A23 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CPNE4Q96A23 AC096633.1-201ENST00000422446 749 ntBASIC15.96■□□□□ 0.15
CPNE4Q96A23 AC096582.2-201ENST00000510860 516 ntBASIC15.96■□□□□ 0.15
CPNE4Q96A23 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CPNE4Q96A23 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE4Q96A23 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE4Q96A23 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE4Q96A23 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE4Q96A23 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE4Q96A23 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE4Q96A23 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.96■□□□□ 0.14
CPNE4Q96A23 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CPNE4Q96A23 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CPNE4Q96A23 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CPNE4Q96A23 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms