Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
RNF34Q969K3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF34Q969K3 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.63■□□□□ 0.57
RNF34Q969K3 MIR3180-1-201ENST00000580374 94 ntBASIC18.63■□□□□ 0.57
RNF34Q969K3 MIR3180-3-201ENST00000584616 94 ntBASIC18.63■□□□□ 0.57
RNF34Q969K3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF34Q969K3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF34Q969K3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF34Q969K3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF34Q969K3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF34Q969K3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
RNF34Q969K3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RNF34Q969K3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF34Q969K3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF34Q969K3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF34Q969K3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF34Q969K3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF34Q969K3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF34Q969K3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF34Q969K3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF34Q969K3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF34Q969K3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF34Q969K3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF34Q969K3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF34Q969K3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF34Q969K3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF34Q969K3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF34Q969K3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
RNF34Q969K3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RNF34Q969K3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF34Q969K3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF34Q969K3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF34Q969K3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
RNF34Q969K3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF34Q969K3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF34Q969K3 AC104819.1-201ENST00000504587 486 ntBASIC18.62■□□□□ 0.57
RNF34Q969K3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF34Q969K3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
RNF34Q969K3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF34Q969K3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF34Q969K3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF34Q969K3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RNF34Q969K3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF34Q969K3 AC233702.3-201ENST00000578656 1387 ntBASIC18.62■□□□□ 0.57
RNF34Q969K3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF34Q969K3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF34Q969K3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF34Q969K3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF34Q969K3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF34Q969K3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF34Q969K3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF34Q969K3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF34Q969K3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RNF34Q969K3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF34Q969K3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF34Q969K3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF34Q969K3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF34Q969K3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RNF34Q969K3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RNF34Q969K3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF34Q969K3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF34Q969K3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RNF34Q969K3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF34Q969K3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF34Q969K3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF34Q969K3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF34Q969K3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF34Q969K3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF34Q969K3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RNF34Q969K3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF34Q969K3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RNF34Q969K3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF34Q969K3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF34Q969K3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF34Q969K3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF34Q969K3 MINOS1P3-201ENST00000457048 203 ntBASIC18.61■□□□□ 0.57
RNF34Q969K3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF34Q969K3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF34Q969K3 AC074051.2-201ENST00000565115 352 ntBASIC18.61■□□□□ 0.57
RNF34Q969K3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF34Q969K3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF34Q969K3 AC116407.2-201ENST00000613639 860 ntBASIC18.61■□□□□ 0.57
RNF34Q969K3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF34Q969K3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF34Q969K3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF34Q969K3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF34Q969K3 AC100803.2-201ENST00000562459 1963 ntBASIC18.61■□□□□ 0.57
RNF34Q969K3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF34Q969K3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RNF34Q969K3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF34Q969K3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF34Q969K3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RNF34Q969K3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF34Q969K3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF34Q969K3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF34Q969K3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF34Q969K3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RNF34Q969K3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF34Q969K3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF34Q969K3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms