Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 AC092338.2-201ENST00000568827 1415 ntBASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 VENTXP5-201ENST00000523979 775 ntBASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 AD000864.1-201ENST00000624076 2295 ntBASIC19.62■□□□□ 0.73
ATRIPQ8WXE1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
ATRIPQ8WXE1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.6■□□□□ 0.73
ATRIPQ8WXE1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.6■□□□□ 0.73
ATRIPQ8WXE1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATRIPQ8WXE1 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.6■□□□□ 0.73
ATRIPQ8WXE1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATRIPQ8WXE1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATRIPQ8WXE1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
ATRIPQ8WXE1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATRIPQ8WXE1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ATRIPQ8WXE1 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.6■□□□□ 0.73
ATRIPQ8WXE1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATRIPQ8WXE1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.6■□□□□ 0.73
ATRIPQ8WXE1 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.6■□□□□ 0.73
ATRIPQ8WXE1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATRIPQ8WXE1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.6■□□□□ 0.73
ATRIPQ8WXE1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATRIPQ8WXE1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATRIPQ8WXE1 AP001094.4-201ENST00000579008 2176 ntBASIC19.6■□□□□ 0.73
ATRIPQ8WXE1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
ATRIPQ8WXE1 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATRIPQ8WXE1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATRIPQ8WXE1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.59■□□□□ 0.73
ATRIPQ8WXE1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATRIPQ8WXE1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATRIPQ8WXE1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.59■□□□□ 0.73
ATRIPQ8WXE1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATRIPQ8WXE1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATRIPQ8WXE1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.59■□□□□ 0.73
ATRIPQ8WXE1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATRIPQ8WXE1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms