Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 AC011676.5-201ENST00000624864 2660 ntBASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 CYP51A1P1-201ENST00000492267 1507 ntBASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15□□□□□ -0.01
RTN4IP1Q8WWV3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 AC112497.1-201ENST00000624824 639 ntBASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 AC133561.5-201ENST00000635547 218 ntBASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 TNRC18P3-201ENST00000441896 2691 ntBASIC14.99□□□□□ -0.01
RTN4IP1Q8WWV3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms