Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 AC011467.4-201ENST00000594891 528 ntBASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
U2AF1L4Q8WU68 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2AF1L4Q8WU68 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
U2AF1L4Q8WU68 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2AF1L4Q8WU68 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.31■□□□□ 0.84
U2AF1L4Q8WU68 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2AF1L4Q8WU68 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.31■□□□□ 0.84
U2AF1L4Q8WU68 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2AF1L4Q8WU68 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2AF1L4Q8WU68 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2AF1L4Q8WU68 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
U2AF1L4Q8WU68 MTCL1P1-201ENST00000446207 792 ntBASIC20.31■□□□□ 0.84
U2AF1L4Q8WU68 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.31■□□□□ 0.84
U2AF1L4Q8WU68 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2AF1L4Q8WU68 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC20.31■□□□□ 0.84
U2AF1L4Q8WU68 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2AF1L4Q8WU68 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.31■□□□□ 0.84
U2AF1L4Q8WU68 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.31■□□□□ 0.84
U2AF1L4Q8WU68 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.31■□□□□ 0.84
U2AF1L4Q8WU68 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
U2AF1L4Q8WU68 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2AF1L4Q8WU68 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
U2AF1L4Q8WU68 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2AF1L4Q8WU68 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
U2AF1L4Q8WU68 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 ALG1L5P-201ENST00000482043 771 ntBASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 AP002472.1-201ENST00000577490 586 ntBASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 AC106028.4-201ENST00000614509 607 ntBASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.3■□□□□ 0.84
U2AF1L4Q8WU68 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2AF1L4Q8WU68 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
U2AF1L4Q8WU68 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
U2AF1L4Q8WU68 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2AF1L4Q8WU68 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2AF1L4Q8WU68 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2AF1L4Q8WU68 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2AF1L4Q8WU68 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2AF1L4Q8WU68 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2AF1L4Q8WU68 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
U2AF1L4Q8WU68 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
U2AF1L4Q8WU68 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.29■□□□□ 0.84
U2AF1L4Q8WU68 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.29■□□□□ 0.84
U2AF1L4Q8WU68 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.29■□□□□ 0.84
U2AF1L4Q8WU68 LHX6-205ENST00000464484 666 ntTSL 2 BASIC20.29■□□□□ 0.84
U2AF1L4Q8WU68 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.29■□□□□ 0.84
U2AF1L4Q8WU68 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.29■□□□□ 0.84
U2AF1L4Q8WU68 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2AF1L4Q8WU68 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2AF1L4Q8WU68 AC005082.1-201ENST00000413042 2259 ntBASIC20.29■□□□□ 0.84
U2AF1L4Q8WU68 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2AF1L4Q8WU68 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
U2AF1L4Q8WU68 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.29■□□□□ 0.84
U2AF1L4Q8WU68 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2AF1L4Q8WU68 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
U2AF1L4Q8WU68 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.29■□□□□ 0.84
U2AF1L4Q8WU68 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
U2AF1L4Q8WU68 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.28■□□□□ 0.84
U2AF1L4Q8WU68 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
U2AF1L4Q8WU68 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2AF1L4Q8WU68 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
U2AF1L4Q8WU68 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.28■□□□□ 0.84
U2AF1L4Q8WU68 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms