Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 PCDHA1-201ENST00000378133 2726 ntBASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 REXO1L11P-201ENST00000620964 1927 ntBASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 KSR1P1-201ENST00000446298 240 ntBASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 AP002982.1-201ENST00000492365 877 ntBASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 MIR3180-5-201ENST00000583743 153 ntBASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CNIH3Q8TBE1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CNIH3Q8TBE1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNIH3Q8TBE1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CNIH3Q8TBE1 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNIH3Q8TBE1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CNIH3Q8TBE1 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNIH3Q8TBE1 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
CNIH3Q8TBE1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.27■□□□□ 0.2
CNIH3Q8TBE1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNIH3Q8TBE1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.27■□□□□ 0.2
CNIH3Q8TBE1 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CNIH3Q8TBE1 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CNIH3Q8TBE1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.27■□□□□ 0.2
CNIH3Q8TBE1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CNIH3Q8TBE1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
CNIH3Q8TBE1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.27■□□□□ 0.2
CNIH3Q8TBE1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.27■□□□□ 0.2
CNIH3Q8TBE1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.27■□□□□ 0.2
CNIH3Q8TBE1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.27■□□□□ 0.2
CNIH3Q8TBE1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CNIH3Q8TBE1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CNIH3Q8TBE1 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CNIH3Q8TBE1 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CNIH3Q8TBE1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
CNIH3Q8TBE1 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CNIH3Q8TBE1 AL603756.1-201ENST00000606511 2163 ntBASIC16.27■□□□□ 0.19
CNIH3Q8TBE1 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CNIH3Q8TBE1 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CNIH3Q8TBE1 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CNIH3Q8TBE1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CNIH3Q8TBE1 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CNIH3Q8TBE1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.27■□□□□ 0.19
CNIH3Q8TBE1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 AC005915.1-201ENST00000624912 2018 ntBASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 KRT17P3-201ENST00000420566 1262 ntBASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 AC011506.1-201ENST00000474329 610 ntBASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 AC026271.3-201ENST00000571884 352 ntBASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 AL353708.3-201ENST00000610272 989 ntBASIC16.26■□□□□ 0.19
CNIH3Q8TBE1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms