Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
LMO3Q8TAP4 AC233702.3-201ENST00000578656 1387 ntBASIC19.03■□□□□ 0.64
LMO3Q8TAP4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LMO3Q8TAP4 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.03■□□□□ 0.64
LMO3Q8TAP4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.03■□□□□ 0.64
LMO3Q8TAP4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LMO3Q8TAP4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LMO3Q8TAP4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
LMO3Q8TAP4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.02■□□□□ 0.64
LMO3Q8TAP4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LMO3Q8TAP4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LMO3Q8TAP4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LMO3Q8TAP4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LMO3Q8TAP4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LMO3Q8TAP4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LMO3Q8TAP4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LMO3Q8TAP4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LMO3Q8TAP4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
LMO3Q8TAP4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.02■□□□□ 0.64
LMO3Q8TAP4 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.02■□□□□ 0.64
LMO3Q8TAP4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LMO3Q8TAP4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.02■□□□□ 0.64
LMO3Q8TAP4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LMO3Q8TAP4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.02■□□□□ 0.64
LMO3Q8TAP4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LMO3Q8TAP4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.02■□□□□ 0.64
LMO3Q8TAP4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.02■□□□□ 0.64
LMO3Q8TAP4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.02■□□□□ 0.64
LMO3Q8TAP4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.02■□□□□ 0.64
LMO3Q8TAP4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
LMO3Q8TAP4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.02■□□□□ 0.63
LMO3Q8TAP4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.63
LMO3Q8TAP4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LMO3Q8TAP4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LMO3Q8TAP4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 MIR1224-201ENST00000408193 85 ntBASIC19.01■□□□□ 0.63
LMO3Q8TAP4 AC002558.1-201ENST00000488906 803 ntBASIC19.01■□□□□ 0.63
LMO3Q8TAP4 AC122714.2-201ENST00000502787 707 ntBASIC19.01■□□□□ 0.63
LMO3Q8TAP4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 AP002414.4-201ENST00000589764 1148 ntBASIC19.01■□□□□ 0.63
LMO3Q8TAP4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LMO3Q8TAP4 KRT18P1-202ENST00000452408 1331 ntBASIC19■□□□□ 0.63
LMO3Q8TAP4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19■□□□□ 0.63
LMO3Q8TAP4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19■□□□□ 0.63
LMO3Q8TAP4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19■□□□□ 0.63
LMO3Q8TAP4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LMO3Q8TAP4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LMO3Q8TAP4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LMO3Q8TAP4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
LMO3Q8TAP4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19■□□□□ 0.63
LMO3Q8TAP4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19■□□□□ 0.63
LMO3Q8TAP4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LMO3Q8TAP4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19■□□□□ 0.63
LMO3Q8TAP4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19■□□□□ 0.63
LMO3Q8TAP4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19■□□□□ 0.63
LMO3Q8TAP4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19■□□□□ 0.63
LMO3Q8TAP4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19■□□□□ 0.63
LMO3Q8TAP4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LMO3Q8TAP4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19■□□□□ 0.63
LMO3Q8TAP4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19■□□□□ 0.63
LMO3Q8TAP4 AL049757.1-201ENST00000616842 1596 ntBASIC19■□□□□ 0.63
LMO3Q8TAP4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
LMO3Q8TAP4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LMO3Q8TAP4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19■□□□□ 0.63
LMO3Q8TAP4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LMO3Q8TAP4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.99■□□□□ 0.63
LMO3Q8TAP4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.99■□□□□ 0.63
LMO3Q8TAP4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LMO3Q8TAP4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LMO3Q8TAP4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LMO3Q8TAP4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
LMO3Q8TAP4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
LMO3Q8TAP4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LMO3Q8TAP4 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LMO3Q8TAP4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms