Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNIP1Q8TAD8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNIP1Q8TAD8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
SNIP1Q8TAD8 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNIP1Q8TAD8 SPDYE21P-201ENST00000413323 827 ntBASIC16.73■□□□□ 0.27
SNIP1Q8TAD8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNIP1Q8TAD8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.73■□□□□ 0.27
SNIP1Q8TAD8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.73■□□□□ 0.27
SNIP1Q8TAD8 AC018845.2-201ENST00000568326 409 ntBASIC16.73■□□□□ 0.27
SNIP1Q8TAD8 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.73■□□□□ 0.27
SNIP1Q8TAD8 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.73■□□□□ 0.27
SNIP1Q8TAD8 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.73■□□□□ 0.27
SNIP1Q8TAD8 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.73■□□□□ 0.27
SNIP1Q8TAD8 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
SNIP1Q8TAD8 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.73■□□□□ 0.27
SNIP1Q8TAD8 AC093028.1-201ENST00000622998 982 ntBASIC16.73■□□□□ 0.27
SNIP1Q8TAD8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNIP1Q8TAD8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNIP1Q8TAD8 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
SNIP1Q8TAD8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.73■□□□□ 0.27
SNIP1Q8TAD8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNIP1Q8TAD8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNIP1Q8TAD8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.73■□□□□ 0.27
SNIP1Q8TAD8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNIP1Q8TAD8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.73■□□□□ 0.27
SNIP1Q8TAD8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 AC108073.2-201ENST00000464002 357 ntBASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 AP000344.2-201ENST00000512987 629 ntBASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 AC004706.3-202ENST00000621574 984 ntBASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 AD001527.2-201ENST00000622994 785 ntBASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 Z99916.3-201ENST00000623422 1080 ntBASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 MYLKP1-201ENST00000509077 1580 ntBASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.72■□□□□ 0.27
SNIP1Q8TAD8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 ELK2BP-201ENST00000415014 1224 ntBASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 AC122714.2-201ENST00000502787 707 ntBASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.71■□□□□ 0.27
SNIP1Q8TAD8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms