Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP38Q8NB14 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP38Q8NB14 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.85■□□□□ 0.77
USP38Q8NB14 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP38Q8NB14 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP38Q8NB14 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP38Q8NB14 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP38Q8NB14 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.85■□□□□ 0.77
USP38Q8NB14 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.85■□□□□ 0.77
USP38Q8NB14 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.85■□□□□ 0.77
USP38Q8NB14 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.85■□□□□ 0.77
USP38Q8NB14 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP38Q8NB14 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.85■□□□□ 0.77
USP38Q8NB14 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.85■□□□□ 0.77
USP38Q8NB14 AC005336.2-201ENST00000593183 939 ntBASIC19.85■□□□□ 0.77
USP38Q8NB14 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.85■□□□□ 0.77
USP38Q8NB14 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP38Q8NB14 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP38Q8NB14 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
USP38Q8NB14 TP73-AS1-210ENST00000637775 1455 ntBASIC19.85■□□□□ 0.77
USP38Q8NB14 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
USP38Q8NB14 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP38Q8NB14 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP38Q8NB14 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP38Q8NB14 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP38Q8NB14 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP38Q8NB14 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP38Q8NB14 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP38Q8NB14 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.84■□□□□ 0.77
USP38Q8NB14 AC067852.2-201ENST00000590513 2313 ntBASIC19.84■□□□□ 0.77
USP38Q8NB14 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP38Q8NB14 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP38Q8NB14 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP38Q8NB14 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP38Q8NB14 MTCL1P1-201ENST00000446207 792 ntBASIC19.84■□□□□ 0.77
USP38Q8NB14 AC132008.2-207ENST00000454517 770 ntBASIC19.84■□□□□ 0.77
USP38Q8NB14 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.84■□□□□ 0.77
USP38Q8NB14 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP38Q8NB14 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.84■□□□□ 0.77
USP38Q8NB14 AC079781.4-201ENST00000641908 219 ntBASIC19.84■□□□□ 0.77
USP38Q8NB14 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP38Q8NB14 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP38Q8NB14 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP38Q8NB14 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP38Q8NB14 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP38Q8NB14 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP38Q8NB14 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP38Q8NB14 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.83■□□□□ 0.77
USP38Q8NB14 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
USP38Q8NB14 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP38Q8NB14 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
USP38Q8NB14 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
USP38Q8NB14 LTB4R2-202ENST00000528054 3092 ntBASIC19.83■□□□□ 0.77
USP38Q8NB14 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP38Q8NB14 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.77
USP38Q8NB14 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
USP38Q8NB14 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.83■□□□□ 0.77
USP38Q8NB14 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP38Q8NB14 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.83■□□□□ 0.77
USP38Q8NB14 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP38Q8NB14 YBX2P1-201ENST00000394192 760 ntBASIC19.83■□□□□ 0.77
USP38Q8NB14 RCN1P2-201ENST00000398357 915 ntBASIC19.83■□□□□ 0.77
USP38Q8NB14 RBM17P3-201ENST00000417687 1192 ntBASIC19.83■□□□□ 0.77
USP38Q8NB14 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
USP38Q8NB14 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
USP38Q8NB14 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.83■□□□□ 0.77
USP38Q8NB14 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.83■□□□□ 0.77
USP38Q8NB14 AC239800.4-201ENST00000603712 296 ntBASIC19.83■□□□□ 0.77
USP38Q8NB14 AC008608.2-201ENST00000606089 416 ntBASIC19.83■□□□□ 0.77
USP38Q8NB14 AC027601.4-201ENST00000611259 610 ntBASIC19.83■□□□□ 0.77
USP38Q8NB14 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP38Q8NB14 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.83■□□□□ 0.76
USP38Q8NB14 AC104109.2-201ENST00000602919 1418 ntBASIC19.83■□□□□ 0.76
USP38Q8NB14 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.83■□□□□ 0.76
USP38Q8NB14 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
USP38Q8NB14 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP38Q8NB14 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.83■□□□□ 0.76
USP38Q8NB14 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
USP38Q8NB14 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
USP38Q8NB14 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.83■□□□□ 0.76
USP38Q8NB14 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
USP38Q8NB14 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.83■□□□□ 0.76
USP38Q8NB14 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.82■□□□□ 0.76
USP38Q8NB14 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP38Q8NB14 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP38Q8NB14 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP38Q8NB14 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP38Q8NB14 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP38Q8NB14 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP38Q8NB14 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.82■□□□□ 0.76
USP38Q8NB14 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP38Q8NB14 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
USP38Q8NB14 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP38Q8NB14 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.82■□□□□ 0.76
USP38Q8NB14 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.82■□□□□ 0.76
USP38Q8NB14 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.82■□□□□ 0.76
USP38Q8NB14 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.82■□□□□ 0.76
USP38Q8NB14 HNRNPDP1-201ENST00000439535 754 ntBASIC19.82■□□□□ 0.76
USP38Q8NB14 KRT18P65-201ENST00000439811 1286 ntBASIC19.82■□□□□ 0.76
USP38Q8NB14 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms