Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 AC139887.3-201ENST00000568585 713 ntBASIC19.29■□□□□ 0.68
VPS52Q8N1B4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 AL138831.2-201ENST00000606564 490 ntBASIC19.29■□□□□ 0.68
VPS52Q8N1B4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 INTS4P1-201ENST00000438455 1935 ntBASIC19.29■□□□□ 0.68
VPS52Q8N1B4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.29■□□□□ 0.68
VPS52Q8N1B4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 AC018470.1-201ENST00000624790 3129 ntBASIC19.29■□□□□ 0.68
VPS52Q8N1B4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS52Q8N1B4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 AL499627.1-201ENST00000569373 2188 ntBASIC19.28■□□□□ 0.68
VPS52Q8N1B4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 KRT18P13-201ENST00000400056 1290 ntBASIC19.28■□□□□ 0.68
VPS52Q8N1B4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 SCARNA2-201ENST00000458748 420 ntBASIC19.28■□□□□ 0.68
VPS52Q8N1B4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 AC106730.1-201ENST00000566722 1090 ntBASIC19.28■□□□□ 0.68
VPS52Q8N1B4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 MIR7706-201ENST00000613747 67 ntBASIC19.28■□□□□ 0.68
VPS52Q8N1B4 AC139530.3-201ENST00000620344 690 ntBASIC19.28■□□□□ 0.68
VPS52Q8N1B4 FAM215A-202ENST00000632077 792 ntBASIC19.28■□□□□ 0.68
VPS52Q8N1B4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS52Q8N1B4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.27■□□□□ 0.68
VPS52Q8N1B4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS52Q8N1B4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.27■□□□□ 0.68
VPS52Q8N1B4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS52Q8N1B4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VPS52Q8N1B4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS52Q8N1B4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.27■□□□□ 0.68
VPS52Q8N1B4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.27■□□□□ 0.68
VPS52Q8N1B4 HNRNPDP1-201ENST00000439535 754 ntBASIC19.27■□□□□ 0.68
VPS52Q8N1B4 RPL13AP23-201ENST00000480739 586 ntBASIC19.27■□□□□ 0.68
VPS52Q8N1B4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.27■□□□□ 0.68
VPS52Q8N1B4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS52Q8N1B4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.27■□□□□ 0.68
VPS52Q8N1B4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
VPS52Q8N1B4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
VPS52Q8N1B4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
VPS52Q8N1B4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
VPS52Q8N1B4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.27■□□□□ 0.67
VPS52Q8N1B4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.26■□□□□ 0.67
VPS52Q8N1B4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
VPS52Q8N1B4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.26■□□□□ 0.67
VPS52Q8N1B4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS52Q8N1B4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
VPS52Q8N1B4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.26■□□□□ 0.67
VPS52Q8N1B4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.26■□□□□ 0.67
VPS52Q8N1B4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms