Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.61■□□□□ 0.41
TMEFF1Q8IYR6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.61■□□□□ 0.41
TMEFF1Q8IYR6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TMEFF1Q8IYR6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEFF1Q8IYR6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.61■□□□□ 0.41
TMEFF1Q8IYR6 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
TMEFF1Q8IYR6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.61■□□□□ 0.41
TMEFF1Q8IYR6 MIR4469-201ENST00000583919 79 ntBASIC17.61■□□□□ 0.41
TMEFF1Q8IYR6 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.61■□□□□ 0.41
TMEFF1Q8IYR6 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.61■□□□□ 0.41
TMEFF1Q8IYR6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.61■□□□□ 0.41
TMEFF1Q8IYR6 AC092865.6-201ENST00000642101 219 ntBASIC17.61■□□□□ 0.41
TMEFF1Q8IYR6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TMEFF1Q8IYR6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEFF1Q8IYR6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEFF1Q8IYR6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEFF1Q8IYR6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.61■□□□□ 0.41
TMEFF1Q8IYR6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.61■□□□□ 0.41
TMEFF1Q8IYR6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEFF1Q8IYR6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.61■□□□□ 0.41
TMEFF1Q8IYR6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TMEFF1Q8IYR6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TMEFF1Q8IYR6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TMEFF1Q8IYR6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.61■□□□□ 0.41
TMEFF1Q8IYR6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 ALG1L5P-201ENST00000482043 771 ntBASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 AL589182.2-201ENST00000619332 1049 ntBASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 SIRPAP1-201ENST00000448467 1770 ntBASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TMEFF1Q8IYR6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 AL031598.1-201ENST00000561511 1773 ntBASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 AC006504.4-201ENST00000592118 1568 ntBASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 KRT8P47-201ENST00000604727 1398 ntBASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 AC103564.2-201ENST00000432853 1299 ntBASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 AC018845.2-201ENST00000568326 409 ntBASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 MIR4751-201ENST00000578027 74 ntBASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEFF1Q8IYR6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
TMEFF1Q8IYR6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TMEFF1Q8IYR6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.58■□□□□ 0.41
TMEFF1Q8IYR6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TMEFF1Q8IYR6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TMEFF1Q8IYR6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.58■□□□□ 0.4
TMEFF1Q8IYR6 AC002310.6-201ENST00000624451 1377 ntBASIC17.58■□□□□ 0.4
TMEFF1Q8IYR6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEFF1Q8IYR6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms