Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.3■□□□□ 0.52
CDKL3Q8IVW4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
CDKL3Q8IVW4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL3Q8IVW4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL3Q8IVW4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL3Q8IVW4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.3■□□□□ 0.52
CDKL3Q8IVW4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.3■□□□□ 0.52
CDKL3Q8IVW4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL3Q8IVW4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDKL3Q8IVW4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL3Q8IVW4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDKL3Q8IVW4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 VENTXP5-201ENST00000523979 775 ntBASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 LINC01311-201ENST00000565162 1445 ntBASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 AC139713.2-201ENST00000641328 2723 ntBASIC18.29■□□□□ 0.52
CDKL3Q8IVW4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 AL023806.1-201ENST00000603994 1649 ntBASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 SIRPAP1-201ENST00000448467 1770 ntBASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 AL645608.8-201ENST00000606034 2086 ntBASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 HYMAI.1-201ENST00000620949 238 ntBASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 PP12613-201ENST00000424958 2230 ntBASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL3Q8IVW4 AC141586.5-201ENST00000624546 2050 ntBASIC18.27■□□□□ 0.52
CDKL3Q8IVW4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CDKL3Q8IVW4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDKL3Q8IVW4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDKL3Q8IVW4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CDKL3Q8IVW4 FZD10-202ENST00000539839 3282 ntBASIC18.27■□□□□ 0.52
CDKL3Q8IVW4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDKL3Q8IVW4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDKL3Q8IVW4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDKL3Q8IVW4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.27■□□□□ 0.52
CDKL3Q8IVW4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDKL3Q8IVW4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.27■□□□□ 0.52
CDKL3Q8IVW4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms