Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MIR4751-201ENST00000578027 74 ntBASIC19.19■□□□□ 0.66
HERC6Q8IVU3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.19■□□□□ 0.66
HERC6Q8IVU3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.19■□□□□ 0.66
HERC6Q8IVU3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.19■□□□□ 0.66
HERC6Q8IVU3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERC6Q8IVU3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERC6Q8IVU3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERC6Q8IVU3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERC6Q8IVU3 ELL2P1-201ENST00000413990 1906 ntBASIC19.19■□□□□ 0.66
HERC6Q8IVU3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HERC6Q8IVU3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HERC6Q8IVU3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERC6Q8IVU3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.19■□□□□ 0.66
HERC6Q8IVU3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.19■□□□□ 0.66
HERC6Q8IVU3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERC6Q8IVU3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERC6Q8IVU3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HERC6Q8IVU3 AC010460.3-201ENST00000511359 1579 ntBASIC19.19■□□□□ 0.66
HERC6Q8IVU3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HERC6Q8IVU3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HERC6Q8IVU3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
HERC6Q8IVU3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HERC6Q8IVU3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HERC6Q8IVU3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HERC6Q8IVU3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HERC6Q8IVU3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HERC6Q8IVU3 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.18■□□□□ 0.66
HERC6Q8IVU3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.18■□□□□ 0.66
HERC6Q8IVU3 MIR770-201ENST00000390219 98 ntBASIC19.18■□□□□ 0.66
HERC6Q8IVU3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HERC6Q8IVU3 HCG4B-203ENST00000450128 991 ntBASIC19.18■□□□□ 0.66
HERC6Q8IVU3 AC108073.2-201ENST00000464002 357 ntBASIC19.18■□□□□ 0.66
HERC6Q8IVU3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
HERC6Q8IVU3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HERC6Q8IVU3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.18■□□□□ 0.66
HERC6Q8IVU3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.18■□□□□ 0.66
HERC6Q8IVU3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.18■□□□□ 0.66
HERC6Q8IVU3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.18■□□□□ 0.66
HERC6Q8IVU3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.18■□□□□ 0.66
HERC6Q8IVU3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.18■□□□□ 0.66
HERC6Q8IVU3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HERC6Q8IVU3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HERC6Q8IVU3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HERC6Q8IVU3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HERC6Q8IVU3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HERC6Q8IVU3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.18■□□□□ 0.66
HERC6Q8IVU3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HERC6Q8IVU3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 CEND1P1-201ENST00000451006 455 ntBASIC19.17■□□□□ 0.66
HERC6Q8IVU3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 AC006504.4-201ENST00000592118 1568 ntBASIC19.17■□□□□ 0.66
HERC6Q8IVU3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.17■□□□□ 0.66
HERC6Q8IVU3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 AC011467.4-201ENST00000594891 528 ntBASIC19.16■□□□□ 0.66
HERC6Q8IVU3 AC073592.5-201ENST00000624854 528 ntBASIC19.16■□□□□ 0.66
HERC6Q8IVU3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.16■□□□□ 0.66
HERC6Q8IVU3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms