Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00346Q8IVM7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC00346Q8IVM7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LINC00346Q8IVM7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC00346Q8IVM7 AC073508.3-201ENST00000619697 1419 ntBASIC15.77■□□□□ 0.12
LINC00346Q8IVM7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.77■□□□□ 0.12
LINC00346Q8IVM7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.77■□□□□ 0.12
LINC00346Q8IVM7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC00346Q8IVM7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC00346Q8IVM7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC00346Q8IVM7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.77■□□□□ 0.12
LINC00346Q8IVM7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC00346Q8IVM7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC00346Q8IVM7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
LINC00346Q8IVM7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC00346Q8IVM7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC00346Q8IVM7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC00346Q8IVM7 AC211429.1-201ENST00000415277 523 ntBASIC15.77■□□□□ 0.12
LINC00346Q8IVM7 AL359075.1-203ENST00000462729 1002 ntBASIC15.77■□□□□ 0.12
LINC00346Q8IVM7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.77■□□□□ 0.12
LINC00346Q8IVM7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.77■□□□□ 0.12
LINC00346Q8IVM7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.77■□□□□ 0.12
LINC00346Q8IVM7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.77■□□□□ 0.12
LINC00346Q8IVM7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
LINC00346Q8IVM7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LINC00346Q8IVM7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LINC00346Q8IVM7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
LINC00346Q8IVM7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
LINC00346Q8IVM7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LINC00346Q8IVM7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
LINC00346Q8IVM7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
LINC00346Q8IVM7 AL645608.8-201ENST00000606034 2086 ntBASIC15.77■□□□□ 0.11
LINC00346Q8IVM7 KRT89P-201ENST00000620027 1478 ntBASIC15.77■□□□□ 0.11
LINC00346Q8IVM7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LINC00346Q8IVM7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LINC00346Q8IVM7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LINC00346Q8IVM7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LINC00346Q8IVM7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LINC00346Q8IVM7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.77■□□□□ 0.11
LINC00346Q8IVM7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LINC00346Q8IVM7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 FAM8A6P-201ENST00000407496 1135 ntBASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 HLA-F-220ENST00000434407 884 ntBASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 KRT18P38-201ENST00000449496 1282 ntBASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.76■□□□□ 0.11
LINC00346Q8IVM7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC00346Q8IVM7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms