Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 TSPY17P-201ENST00000450329 467 ntBASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 AL353719.1-201ENST00000566847 864 ntBASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 AL023803.3-201ENST00000615559 522 ntBASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
NUDCD3Q8IVD9 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 AC010240.3-201ENST00000607688 395 ntBASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 AC116407.2-201ENST00000613639 860 ntBASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 REXO1L10P-201ENST00000615707 1290 ntBASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 REXO1L12P-201ENST00000622156 912 ntBASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 LINC01451-201ENST00000623792 534 ntBASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NUDCD3Q8IVD9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NUDCD3Q8IVD9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms