Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF550Q7Z398 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.42■□□□□ 0.22
ZNF550Q7Z398 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.42■□□□□ 0.22
ZNF550Q7Z398 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF550Q7Z398 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
ZNF550Q7Z398 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF550Q7Z398 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 MIR662-201ENST00000384847 95 ntBASIC16.41■□□□□ 0.22
ZNF550Q7Z398 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 HYMAI.1-201ENST00000620949 238 ntBASIC16.41■□□□□ 0.22
ZNF550Q7Z398 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF550Q7Z398 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 KRT18P56-201ENST00000507275 550 ntBASIC16.4■□□□□ 0.22
ZNF550Q7Z398 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 AC116407.4-201ENST00000623319 1061 ntBASIC16.4■□□□□ 0.22
ZNF550Q7Z398 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.4■□□□□ 0.22
ZNF550Q7Z398 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
ZNF550Q7Z398 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF550Q7Z398 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
ZNF550Q7Z398 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF550Q7Z398 HBZP1-201ENST00000354915 429 ntBASIC16.39■□□□□ 0.21
ZNF550Q7Z398 IGHGP-201ENST00000390555 1178 ntBASIC16.39■□□□□ 0.21
ZNF550Q7Z398 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.39■□□□□ 0.21
ZNF550Q7Z398 DDX43P3-201ENST00000441064 443 ntBASIC16.39■□□□□ 0.21
ZNF550Q7Z398 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.39■□□□□ 0.21
ZNF550Q7Z398 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ZNF550Q7Z398 AL136038.3-201ENST00000561909 1096 ntBASIC16.39■□□□□ 0.21
ZNF550Q7Z398 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.39■□□□□ 0.21
ZNF550Q7Z398 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF550Q7Z398 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms