Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.11■□□□□ 0.17
SHFQ7M4L6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
SHFQ7M4L6 AC010653.2-201ENST00000623505 997 ntBASIC16.11■□□□□ 0.17
SHFQ7M4L6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
SHFQ7M4L6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHFQ7M4L6 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SHFQ7M4L6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHFQ7M4L6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHFQ7M4L6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SHFQ7M4L6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SHFQ7M4L6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.11■□□□□ 0.17
SHFQ7M4L6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHFQ7M4L6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
SHFQ7M4L6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.11■□□□□ 0.17
SHFQ7M4L6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.11■□□□□ 0.17
SHFQ7M4L6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.11■□□□□ 0.17
SHFQ7M4L6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SHFQ7M4L6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHFQ7M4L6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.1■□□□□ 0.17
SHFQ7M4L6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
SHFQ7M4L6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SHFQ7M4L6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SHFQ7M4L6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SHFQ7M4L6 AL138688.1-201ENST00000624851 1594 ntBASIC16.1■□□□□ 0.17
SHFQ7M4L6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
SHFQ7M4L6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SHFQ7M4L6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.1■□□□□ 0.17
SHFQ7M4L6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.1■□□□□ 0.17
SHFQ7M4L6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHFQ7M4L6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SHFQ7M4L6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SHFQ7M4L6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SHFQ7M4L6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.1■□□□□ 0.17
SHFQ7M4L6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.1■□□□□ 0.17
SHFQ7M4L6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SHFQ7M4L6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHFQ7M4L6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
SHFQ7M4L6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHFQ7M4L6 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHFQ7M4L6 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHFQ7M4L6 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SHFQ7M4L6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHFQ7M4L6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHFQ7M4L6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHFQ7M4L6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.1■□□□□ 0.17
SHFQ7M4L6 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.1■□□□□ 0.17
SHFQ7M4L6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHFQ7M4L6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHFQ7M4L6 AC008550.1-201ENST00000511500 884 ntBASIC16.1■□□□□ 0.17
SHFQ7M4L6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.1■□□□□ 0.17
SHFQ7M4L6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SHFQ7M4L6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.1■□□□□ 0.17
SHFQ7M4L6 AC008894.3-201ENST00000624324 3103 ntBASIC16.1■□□□□ 0.17
SHFQ7M4L6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SHFQ7M4L6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.1■□□□□ 0.17
SHFQ7M4L6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHFQ7M4L6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.1■□□□□ 0.17
SHFQ7M4L6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHFQ7M4L6 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHFQ7M4L6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SHFQ7M4L6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHFQ7M4L6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHFQ7M4L6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHFQ7M4L6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHFQ7M4L6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHFQ7M4L6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.1■□□□□ 0.17
SHFQ7M4L6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SHFQ7M4L6 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHFQ7M4L6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHFQ7M4L6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHFQ7M4L6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.09■□□□□ 0.17
SHFQ7M4L6 AC011270.2-201ENST00000624293 2550 ntBASIC16.09■□□□□ 0.17
SHFQ7M4L6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHFQ7M4L6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHFQ7M4L6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
SHFQ7M4L6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SHFQ7M4L6 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SHFQ7M4L6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHFQ7M4L6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.09■□□□□ 0.17
SHFQ7M4L6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SHFQ7M4L6 AC007663.1-201ENST00000438948 1240 ntBASIC16.09■□□□□ 0.17
SHFQ7M4L6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.09■□□□□ 0.17
SHFQ7M4L6 AP000525.1-201ENST00000608286 694 ntBASIC16.09■□□□□ 0.17
SHFQ7M4L6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.09■□□□□ 0.17
SHFQ7M4L6 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHFQ7M4L6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHFQ7M4L6 KRT17P2-201ENST00000300992 1314 ntBASIC16.09■□□□□ 0.17
SHFQ7M4L6 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHFQ7M4L6 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHFQ7M4L6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHFQ7M4L6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SHFQ7M4L6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SHFQ7M4L6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SHFQ7M4L6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
SHFQ7M4L6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SHFQ7M4L6 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
SHFQ7M4L6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SHFQ7M4L6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
SHFQ7M4L6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.08■□□□□ 0.17
SHFQ7M4L6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms