Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.88■□□□□ 0.61
CCNI2Q6ZMN8 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNI2Q6ZMN8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.88■□□□□ 0.61
CCNI2Q6ZMN8 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNI2Q6ZMN8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNI2Q6ZMN8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNI2Q6ZMN8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNI2Q6ZMN8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCNI2Q6ZMN8 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNI2Q6ZMN8 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNI2Q6ZMN8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CCNI2Q6ZMN8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCNI2Q6ZMN8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.88■□□□□ 0.61
CCNI2Q6ZMN8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCNI2Q6ZMN8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.88■□□□□ 0.61
CCNI2Q6ZMN8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.88■□□□□ 0.61
CCNI2Q6ZMN8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCNI2Q6ZMN8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.88■□□□□ 0.61
CCNI2Q6ZMN8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCNI2Q6ZMN8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 AC004980.1-204ENST00000429707 299 ntBASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 HCG4P8-203ENST00000443049 980 ntBASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 SLC25A1P4-201ENST00000567977 778 ntBASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 CLEC4GP1-201ENST00000596555 870 ntBASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 AL691432.3-201ENST00000621860 400 ntBASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.87■□□□□ 0.61
CCNI2Q6ZMN8 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 MIR564-202ENST00000385049 94 ntBASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 AP000692.2-201ENST00000608391 879 ntBASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 AC131212.4-201ENST00000623606 975 ntBASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCNI2Q6ZMN8 AC133963.1-201ENST00000504166 1679 ntBASIC18.85■□□□□ 0.61
CCNI2Q6ZMN8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.85■□□□□ 0.61
CCNI2Q6ZMN8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCNI2Q6ZMN8 PCDHB19P-201ENST00000570871 2371 ntBASIC18.85■□□□□ 0.61
CCNI2Q6ZMN8 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCNI2Q6ZMN8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCNI2Q6ZMN8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms