Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC11.29□□□□□ -0.6
LINC00575Q6W349 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC00575Q6W349 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00575Q6W349 KLF2-202ENST00000592003 564 ntTSL 3 BASIC11.29□□□□□ -0.6
LINC00575Q6W349 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00575Q6W349 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00575Q6W349 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00575Q6W349 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00575Q6W349 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
LINC00575Q6W349 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00575Q6W349 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00575Q6W349 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00575Q6W349 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00575Q6W349 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00575Q6W349 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC00575Q6W349 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
LINC00575Q6W349 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
LINC00575Q6W349 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC11.29□□□□□ -0.6
LINC00575Q6W349 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC00575Q6W349 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00575Q6W349 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00575Q6W349 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00575Q6W349 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC00575Q6W349 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00575Q6W349 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
LINC00575Q6W349 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00575Q6W349 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
LINC00575Q6W349 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00575Q6W349 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
LINC00575Q6W349 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00575Q6W349 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00575Q6W349 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
LINC00575Q6W349 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
LINC00575Q6W349 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
LINC00575Q6W349 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00575Q6W349 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00575Q6W349 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00575Q6W349 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00575Q6W349 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
LINC00575Q6W349 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00575Q6W349 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00575Q6W349 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00575Q6W349 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00575Q6W349 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00575Q6W349 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00575Q6W349 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
LINC00575Q6W349 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00575Q6W349 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00575Q6W349 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
LINC00575Q6W349 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00575Q6W349 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC11.28□□□□□ -0.6
LINC00575Q6W349 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00575Q6W349 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC11.28□□□□□ -0.6
LINC00575Q6W349 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00575Q6W349 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00575Q6W349 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00575Q6W349 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
LINC00575Q6W349 AC004911.1-201ENST00000416316 871 ntBASIC11.28□□□□□ -0.6
LINC00575Q6W349 AC097658.1-201ENST00000475555 843 ntBASIC11.28□□□□□ -0.6
LINC00575Q6W349 AC091390.4-202ENST00000476426 537 ntBASIC11.28□□□□□ -0.6
LINC00575Q6W349 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC11.28□□□□□ -0.6
LINC00575Q6W349 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC11.28□□□□□ -0.6
LINC00575Q6W349 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00575Q6W349 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00575Q6W349 CKBP1-201ENST00000565489 1086 ntBASIC11.28□□□□□ -0.6
LINC00575Q6W349 AL445675.2-201ENST00000620291 557 ntBASIC11.28□□□□□ -0.6
LINC00575Q6W349 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC11.28□□□□□ -0.6
LINC00575Q6W349 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00575Q6W349 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
LINC00575Q6W349 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00575Q6W349 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00575Q6W349 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00575Q6W349 AC100803.2-201ENST00000562459 1963 ntBASIC11.28□□□□□ -0.6
LINC00575Q6W349 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00575Q6W349 AC060834.1-201ENST00000443027 2032 ntBASIC11.28□□□□□ -0.6
LINC00575Q6W349 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00575Q6W349 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00575Q6W349 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00575Q6W349 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
LINC00575Q6W349 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
LINC00575Q6W349 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00575Q6W349 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00575Q6W349 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC11.27□□□□□ -0.6
LINC00575Q6W349 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
LINC00575Q6W349 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00575Q6W349 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00575Q6W349 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
LINC00575Q6W349 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00575Q6W349 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC11.27□□□□□ -0.6
LINC00575Q6W349 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC11.27□□□□□ -0.6
LINC00575Q6W349 AC008741.2-201ENST00000612792 3115 ntBASIC11.27□□□□□ -0.6
LINC00575Q6W349 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC11.27□□□□□ -0.6
LINC00575Q6W349 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00575Q6W349 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00575Q6W349 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC11.27□□□□□ -0.6
LINC00575Q6W349 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC00575Q6W349 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00575Q6W349 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
LINC00575Q6W349 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC00575Q6W349 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms