Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC141586.5-201ENST00000624546 2050 ntBASIC17.67■□□□□ 0.42
ZNF549Q6P9A3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
ZNF549Q6P9A3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF549Q6P9A3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF549Q6P9A3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF549Q6P9A3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF549Q6P9A3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF549Q6P9A3 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.67■□□□□ 0.42
ZNF549Q6P9A3 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF549Q6P9A3 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.67■□□□□ 0.42
ZNF549Q6P9A3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
ZNF549Q6P9A3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.67■□□□□ 0.42
ZNF549Q6P9A3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
ZNF549Q6P9A3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF549Q6P9A3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ZNF549Q6P9A3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF549Q6P9A3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF549Q6P9A3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF549Q6P9A3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF549Q6P9A3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF549Q6P9A3 LTB4R2-202ENST00000528054 3092 ntBASIC17.67■□□□□ 0.42
ZNF549Q6P9A3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF549Q6P9A3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF549Q6P9A3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.67■□□□□ 0.42
ZNF549Q6P9A3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.67■□□□□ 0.42
ZNF549Q6P9A3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZNF549Q6P9A3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 MTCL1P1-201ENST00000446207 792 ntBASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 KRT18P21-201ENST00000515767 1272 ntBASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF549Q6P9A3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF549Q6P9A3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF549Q6P9A3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ZNF549Q6P9A3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF549Q6P9A3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.65■□□□□ 0.42
ZNF549Q6P9A3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
ZNF549Q6P9A3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF549Q6P9A3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
ZNF549Q6P9A3 DDX43P3-201ENST00000441064 443 ntBASIC17.65■□□□□ 0.42
ZNF549Q6P9A3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.65■□□□□ 0.42
ZNF549Q6P9A3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.65■□□□□ 0.42
ZNF549Q6P9A3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.65■□□□□ 0.42
ZNF549Q6P9A3 AC116407.2-201ENST00000613639 860 ntBASIC17.65■□□□□ 0.42
ZNF549Q6P9A3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.65■□□□□ 0.42
ZNF549Q6P9A3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF549Q6P9A3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF549Q6P9A3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF549Q6P9A3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF549Q6P9A3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
ZNF549Q6P9A3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF549Q6P9A3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ZNF549Q6P9A3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF549Q6P9A3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF549Q6P9A3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF549Q6P9A3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.65■□□□□ 0.42
ZNF549Q6P9A3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ZNF549Q6P9A3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ZNF549Q6P9A3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ZNF549Q6P9A3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ZNF549Q6P9A3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
ZNF549Q6P9A3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
ZNF549Q6P9A3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF549Q6P9A3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF549Q6P9A3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF549Q6P9A3 AC020916.1-201ENST00000587762 1774 ntBASIC17.64■□□□□ 0.41
ZNF549Q6P9A3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms