Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC38Q5VT99 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LRRC38Q5VT99 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC38Q5VT99 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC38Q5VT99 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRC38Q5VT99 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.47■□□□□ 0.55
LRRC38Q5VT99 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.47■□□□□ 0.55
LRRC38Q5VT99 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC38Q5VT99 Z83836.1-201ENST00000624605 1642 ntBASIC18.47■□□□□ 0.55
LRRC38Q5VT99 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC38Q5VT99 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC38Q5VT99 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC38Q5VT99 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.47■□□□□ 0.55
LRRC38Q5VT99 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC38Q5VT99 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC38Q5VT99 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC38Q5VT99 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC38Q5VT99 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.47■□□□□ 0.55
LRRC38Q5VT99 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.47■□□□□ 0.55
LRRC38Q5VT99 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC38Q5VT99 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.46■□□□□ 0.55
LRRC38Q5VT99 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
LRRC38Q5VT99 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC38Q5VT99 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC38Q5VT99 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC38Q5VT99 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC38Q5VT99 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC38Q5VT99 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
LRRC38Q5VT99 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.46■□□□□ 0.55
LRRC38Q5VT99 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC38Q5VT99 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC38Q5VT99 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC38Q5VT99 AP001094.4-201ENST00000579008 2176 ntBASIC18.46■□□□□ 0.55
LRRC38Q5VT99 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC38Q5VT99 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC38Q5VT99 AC016396.2-201ENST00000562575 1417 ntBASIC18.46■□□□□ 0.55
LRRC38Q5VT99 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC38Q5VT99 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC38Q5VT99 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC38Q5VT99 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
LRRC38Q5VT99 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 AC083849.1-201ENST00000615227 514 ntBASIC18.45■□□□□ 0.54
LRRC38Q5VT99 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC38Q5VT99 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC38Q5VT99 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
LRRC38Q5VT99 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.44■□□□□ 0.54
LRRC38Q5VT99 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC38Q5VT99 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC38Q5VT99 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC38Q5VT99 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
LRRC38Q5VT99 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC38Q5VT99 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC38Q5VT99 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
LRRC38Q5VT99 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC38Q5VT99 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC38Q5VT99 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.44■□□□□ 0.54
LRRC38Q5VT99 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC38Q5VT99 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LRRC38Q5VT99 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.44■□□□□ 0.54
LRRC38Q5VT99 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC38Q5VT99 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC38Q5VT99 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
LRRC38Q5VT99 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC38Q5VT99 COX5BP2-201ENST00000392354 334 ntBASIC18.44■□□□□ 0.54
LRRC38Q5VT99 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC38Q5VT99 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LRRC38Q5VT99 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms