Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC19.78■□□□□ 0.76
COL13A1Q5TAT6 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL13A1Q5TAT6 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.78■□□□□ 0.76
COL13A1Q5TAT6 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.78■□□□□ 0.76
COL13A1Q5TAT6 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.78■□□□□ 0.76
COL13A1Q5TAT6 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.78■□□□□ 0.76
COL13A1Q5TAT6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.78■□□□□ 0.76
COL13A1Q5TAT6 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.78■□□□□ 0.76
COL13A1Q5TAT6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.78■□□□□ 0.76
COL13A1Q5TAT6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL13A1Q5TAT6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.78■□□□□ 0.76
COL13A1Q5TAT6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.77■□□□□ 0.76
COL13A1Q5TAT6 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL13A1Q5TAT6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL13A1Q5TAT6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL13A1Q5TAT6 FEM1AP3-201ENST00000403722 1741 ntBASIC19.77■□□□□ 0.76
COL13A1Q5TAT6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL13A1Q5TAT6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL13A1Q5TAT6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL13A1Q5TAT6 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL13A1Q5TAT6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL13A1Q5TAT6 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.77■□□□□ 0.76
COL13A1Q5TAT6 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL13A1Q5TAT6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.77■□□□□ 0.76
COL13A1Q5TAT6 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
COL13A1Q5TAT6 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL13A1Q5TAT6 AC103564.2-201ENST00000432853 1299 ntBASIC19.77■□□□□ 0.76
COL13A1Q5TAT6 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC19.77■□□□□ 0.76
COL13A1Q5TAT6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL13A1Q5TAT6 IGHJ2P-201ENST00000454480 60 ntBASIC19.77■□□□□ 0.76
COL13A1Q5TAT6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.77■□□□□ 0.76
COL13A1Q5TAT6 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
COL13A1Q5TAT6 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.77■□□□□ 0.76
COL13A1Q5TAT6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL13A1Q5TAT6 FBXW4P1-201ENST00000426721 2239 ntBASIC19.77■□□□□ 0.76
COL13A1Q5TAT6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.77■□□□□ 0.76
COL13A1Q5TAT6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.77■□□□□ 0.76
COL13A1Q5TAT6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL13A1Q5TAT6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.77■□□□□ 0.75
COL13A1Q5TAT6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
COL13A1Q5TAT6 TUBB1P2-201ENST00000422712 1306 ntBASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 TUBB1P1-201ENST00000503144 1300 ntBASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 AL391825.1-201ENST00000457671 1364 ntBASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 AC015967.2-201ENST00000624092 234 ntBASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 AC006435.4-201ENST00000625037 234 ntBASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 AL356737.1-201ENST00000634391 234 ntBASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.76■□□□□ 0.75
COL13A1Q5TAT6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL13A1Q5TAT6 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.75■□□□□ 0.75
COL13A1Q5TAT6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL13A1Q5TAT6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL13A1Q5TAT6 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC19.75■□□□□ 0.75
COL13A1Q5TAT6 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL13A1Q5TAT6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL13A1Q5TAT6 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC19.75■□□□□ 0.75
COL13A1Q5TAT6 HINT2P1-201ENST00000419438 481 ntBASIC19.75■□□□□ 0.75
COL13A1Q5TAT6 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC19.75■□□□□ 0.75
COL13A1Q5TAT6 ZNF767P-206ENST00000513792 565 ntBASIC19.75■□□□□ 0.75
COL13A1Q5TAT6 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC19.75■□□□□ 0.75
COL13A1Q5TAT6 EMC4-209ENST00000559421 497 ntTSL 2 BASIC19.75■□□□□ 0.75
COL13A1Q5TAT6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL13A1Q5TAT6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.75■□□□□ 0.75
COL13A1Q5TAT6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL13A1Q5TAT6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL13A1Q5TAT6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.75■□□□□ 0.75
COL13A1Q5TAT6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.75■□□□□ 0.75
COL13A1Q5TAT6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL13A1Q5TAT6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
COL13A1Q5TAT6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL13A1Q5TAT6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL13A1Q5TAT6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
COL13A1Q5TAT6 FEM1AP4-201ENST00000443167 1987 ntBASIC19.74■□□□□ 0.75
COL13A1Q5TAT6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL13A1Q5TAT6 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC19.74■□□□□ 0.75
COL13A1Q5TAT6 APOC3-202ENST00000375345 604 ntTSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms