Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SGO1Q5FBB7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.33■□□□□ 0.36
SGO1Q5FBB7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SGO1Q5FBB7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 AL391807.1-203ENST00000604392 2365 ntBASIC17.32■□□□□ 0.36
SGO1Q5FBB7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 AC113347.1-201ENST00000413321 391 ntBASIC17.32■□□□□ 0.36
SGO1Q5FBB7 KRT18P57-201ENST00000443599 1254 ntBASIC17.32■□□□□ 0.36
SGO1Q5FBB7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 AL136038.4-201ENST00000603606 1261 ntBASIC17.32■□□□□ 0.36
SGO1Q5FBB7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 AL031432.5-201ENST00000641059 760 ntBASIC17.32■□□□□ 0.36
SGO1Q5FBB7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 PP12613-201ENST00000424958 2230 ntBASIC17.32■□□□□ 0.36
SGO1Q5FBB7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SGO1Q5FBB7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.31■□□□□ 0.36
SGO1Q5FBB7 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 AC139713.2-201ENST00000641328 2723 ntBASIC17.31■□□□□ 0.36
SGO1Q5FBB7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 TERF1P1-201ENST00000311003 1181 ntBASIC17.31■□□□□ 0.36
SGO1Q5FBB7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 SPDYE15P-201ENST00000424157 909 ntBASIC17.31■□□□□ 0.36
SGO1Q5FBB7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.31■□□□□ 0.36
SGO1Q5FBB7 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SGO1Q5FBB7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SGO1Q5FBB7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SGO1Q5FBB7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.3■□□□□ 0.36
SGO1Q5FBB7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SGO1Q5FBB7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SGO1Q5FBB7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
SGO1Q5FBB7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SGO1Q5FBB7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SGO1Q5FBB7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SGO1Q5FBB7 AC005521.1-201ENST00000393351 872 ntBASIC17.3■□□□□ 0.36
SGO1Q5FBB7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.3■□□□□ 0.36
SGO1Q5FBB7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.3■□□□□ 0.36
SGO1Q5FBB7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.3■□□□□ 0.36
SGO1Q5FBB7 AC092597.1-201ENST00000487352 616 ntBASIC17.3■□□□□ 0.36
SGO1Q5FBB7 YBX1P2-201ENST00000489612 999 ntBASIC17.3■□□□□ 0.36
SGO1Q5FBB7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.3■□□□□ 0.36
SGO1Q5FBB7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.3■□□□□ 0.36
SGO1Q5FBB7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SGO1Q5FBB7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.3■□□□□ 0.36
SGO1Q5FBB7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
SGO1Q5FBB7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SGO1Q5FBB7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SGO1Q5FBB7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SGO1Q5FBB7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.3■□□□□ 0.36
SGO1Q5FBB7 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.3■□□□□ 0.36
SGO1Q5FBB7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms