Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.55■□□□□ 0.56
ATP13A4Q4VNC1 MTCL1P1-201ENST00000446207 792 ntBASIC18.55■□□□□ 0.56
ATP13A4Q4VNC1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.55■□□□□ 0.56
ATP13A4Q4VNC1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.55■□□□□ 0.56
ATP13A4Q4VNC1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.55■□□□□ 0.56
ATP13A4Q4VNC1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.55■□□□□ 0.56
ATP13A4Q4VNC1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.55■□□□□ 0.56
ATP13A4Q4VNC1 CROCCP2-202ENST00000412962 2773 ntBASIC18.55■□□□□ 0.56
ATP13A4Q4VNC1 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ATP13A4Q4VNC1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP13A4Q4VNC1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP13A4Q4VNC1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
ATP13A4Q4VNC1 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP13A4Q4VNC1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
ATP13A4Q4VNC1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.55■□□□□ 0.56
ATP13A4Q4VNC1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 AC116407.2-201ENST00000613639 860 ntBASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ATP13A4Q4VNC1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP13A4Q4VNC1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.53■□□□□ 0.56
ATP13A4Q4VNC1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATP13A4Q4VNC1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP13A4Q4VNC1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATP13A4Q4VNC1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP13A4Q4VNC1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP13A4Q4VNC1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP13A4Q4VNC1 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
ATP13A4Q4VNC1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP13A4Q4VNC1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP13A4Q4VNC1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.53■□□□□ 0.56
ATP13A4Q4VNC1 AL671277.2-201ENST00000458060 996 ntBASIC18.53■□□□□ 0.56
ATP13A4Q4VNC1 KRT18P21-201ENST00000515767 1272 ntBASIC18.53■□□□□ 0.56
ATP13A4Q4VNC1 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP13A4Q4VNC1 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP13A4Q4VNC1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.53■□□□□ 0.56
ATP13A4Q4VNC1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ATP13A4Q4VNC1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP13A4Q4VNC1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP13A4Q4VNC1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP13A4Q4VNC1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP13A4Q4VNC1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATP13A4Q4VNC1 AC090340.1-201ENST00000620778 4980 ntBASIC18.53■□□□□ 0.56
ATP13A4Q4VNC1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ATP13A4Q4VNC1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ATP13A4Q4VNC1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
ATP13A4Q4VNC1 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP13A4Q4VNC1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
ATP13A4Q4VNC1 HLA-J-201ENST00000462773 1622 ntBASIC18.52■□□□□ 0.56
ATP13A4Q4VNC1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP13A4Q4VNC1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.52■□□□□ 0.56
ATP13A4Q4VNC1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
ATP13A4Q4VNC1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP13A4Q4VNC1 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.52■□□□□ 0.56
ATP13A4Q4VNC1 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP13A4Q4VNC1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP13A4Q4VNC1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP13A4Q4VNC1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.52■□□□□ 0.56
ATP13A4Q4VNC1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.52■□□□□ 0.56
ATP13A4Q4VNC1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.52■□□□□ 0.56
ATP13A4Q4VNC1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
ATP13A4Q4VNC1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.52■□□□□ 0.56
ATP13A4Q4VNC1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP13A4Q4VNC1 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ATP13A4Q4VNC1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ATP13A4Q4VNC1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.52■□□□□ 0.56
ATP13A4Q4VNC1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
ATP13A4Q4VNC1 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP13A4Q4VNC1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms