Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 LINC00602-201ENST00000629776 2065 ntBASIC15.95■□□□□ 0.14
CCDC58Q4VC31 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 AL355312.1-201ENST00000407115 2176 ntBASIC15.95■□□□□ 0.14
CCDC58Q4VC31 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC58Q4VC31 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 AL121761.2-201ENST00000598007 1648 ntBASIC15.94■□□□□ 0.14
CCDC58Q4VC31 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 AP001094.4-201ENST00000579008 2176 ntBASIC15.94■□□□□ 0.14
CCDC58Q4VC31 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.94■□□□□ 0.14
CCDC58Q4VC31 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 AC099343.3-201ENST00000605834 2503 ntBASIC15.93■□□□□ 0.14
CCDC58Q4VC31 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC58Q4VC31 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms