Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CERKLQ49MI3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.74■□□□□ 0.91
CERKLQ49MI3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.74■□□□□ 0.91
CERKLQ49MI3 AC006557.2-201ENST00000592985 1240 ntBASIC20.74■□□□□ 0.91
CERKLQ49MI3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.74■□□□□ 0.91
CERKLQ49MI3 AL356488.2-201ENST00000602755 427 ntBASIC20.74■□□□□ 0.91
CERKLQ49MI3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
CERKLQ49MI3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CERKLQ49MI3 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.74■□□□□ 0.91
CERKLQ49MI3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CERKLQ49MI3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.74■□□□□ 0.91
CERKLQ49MI3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.74■□□□□ 0.91
CERKLQ49MI3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.73■□□□□ 0.91
CERKLQ49MI3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.73■□□□□ 0.91
CERKLQ49MI3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.73■□□□□ 0.91
CERKLQ49MI3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CERKLQ49MI3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CERKLQ49MI3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CERKLQ49MI3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CERKLQ49MI3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CERKLQ49MI3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CERKLQ49MI3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CERKLQ49MI3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CERKLQ49MI3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.73■□□□□ 0.91
CERKLQ49MI3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CERKLQ49MI3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.73■□□□□ 0.91
CERKLQ49MI3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CERKLQ49MI3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CERKLQ49MI3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.73■□□□□ 0.91
CERKLQ49MI3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CERKLQ49MI3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.73■□□□□ 0.91
CERKLQ49MI3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.73■□□□□ 0.91
CERKLQ49MI3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CERKLQ49MI3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.73■□□□□ 0.91
CERKLQ49MI3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CERKLQ49MI3 AC140113.2-201ENST00000604370 208 ntBASIC20.73■□□□□ 0.91
CERKLQ49MI3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CERKLQ49MI3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CERKLQ49MI3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CERKLQ49MI3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.73■□□□□ 0.91
CERKLQ49MI3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CERKLQ49MI3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CERKLQ49MI3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CERKLQ49MI3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CERKLQ49MI3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
CERKLQ49MI3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CERKLQ49MI3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CERKLQ49MI3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CERKLQ49MI3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
CERKLQ49MI3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CERKLQ49MI3 AC148477.5-201ENST00000625164 1645 ntBASIC20.72■□□□□ 0.91
CERKLQ49MI3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CERKLQ49MI3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CERKLQ49MI3 MED15P5-201ENST00000423150 992 ntBASIC20.72■□□□□ 0.91
CERKLQ49MI3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.72■□□□□ 0.91
CERKLQ49MI3 AC092865.5-201ENST00000545435 363 ntBASIC20.72■□□□□ 0.91
CERKLQ49MI3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.72■□□□□ 0.91
CERKLQ49MI3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CERKLQ49MI3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CERKLQ49MI3 FAM197Y3-203ENST00000618346 717 ntBASIC20.72■□□□□ 0.91
CERKLQ49MI3 AL589182.2-201ENST00000619332 1049 ntBASIC20.72■□□□□ 0.91
CERKLQ49MI3 MIR1199-201ENST00000621445 119 ntBASIC20.72■□□□□ 0.91
CERKLQ49MI3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CERKLQ49MI3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CERKLQ49MI3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CERKLQ49MI3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CERKLQ49MI3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CERKLQ49MI3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CERKLQ49MI3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CERKLQ49MI3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.71■□□□□ 0.91
CERKLQ49MI3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CERKLQ49MI3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CERKLQ49MI3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.71■□□□□ 0.91
CERKLQ49MI3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CERKLQ49MI3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CERKLQ49MI3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CERKLQ49MI3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CERKLQ49MI3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
CERKLQ49MI3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CERKLQ49MI3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CERKLQ49MI3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CERKLQ49MI3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CERKLQ49MI3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.71■□□□□ 0.91
CERKLQ49MI3 AC073621.1-201ENST00000392730 636 ntBASIC20.71■□□□□ 0.91
CERKLQ49MI3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.71■□□□□ 0.91
CERKLQ49MI3 KLF4P1-201ENST00000412782 1185 ntBASIC20.71■□□□□ 0.91
CERKLQ49MI3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CERKLQ49MI3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.71■□□□□ 0.91
CERKLQ49MI3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.71■□□□□ 0.91
CERKLQ49MI3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CERKLQ49MI3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CERKLQ49MI3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.71■□□□□ 0.91
CERKLQ49MI3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CERKLQ49MI3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CERKLQ49MI3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CERKLQ49MI3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CERKLQ49MI3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.71■□□□□ 0.91
CERKLQ49MI3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CERKLQ49MI3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CERKLQ49MI3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms