Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 AC124016.1-201ENST00000609552 612 ntBASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 AC132938.6-201ENST00000623828 1655 ntBASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.8□□□□□ -0.04
ANKRD55Q3KP44 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 KSR1P1-201ENST00000446298 240 ntBASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 AC098590.1-201ENST00000468126 897 ntBASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 AP002982.1-201ENST00000492365 877 ntBASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ANKRD55Q3KP44 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 AC060834.1-201ENST00000443027 2032 ntBASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 AL353807.1-201ENST00000427475 662 ntBASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 AC011506.1-201ENST00000474329 610 ntBASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 AC026271.3-201ENST00000571884 352 ntBASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 MIR3180-5-201ENST00000583743 153 ntBASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 AL353708.3-201ENST00000610272 989 ntBASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
ANKRD55Q3KP44 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms