Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SEC61A1P61619 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.62■□□□□ 0.09
SEC61A1P61619 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SEC61A1P61619 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SEC61A1P61619 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SEC61A1P61619 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SEC61A1P61619 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SEC61A1P61619 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SEC61A1P61619 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.62■□□□□ 0.09
SEC61A1P61619 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SEC61A1P61619 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
SEC61A1P61619 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SEC61A1P61619 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.62■□□□□ 0.09
SEC61A1P61619 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SEC61A1P61619 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SEC61A1P61619 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEC61A1P61619 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEC61A1P61619 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEC61A1P61619 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SEC61A1P61619 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEC61A1P61619 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEC61A1P61619 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEC61A1P61619 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEC61A1P61619 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SEC61A1P61619 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SEC61A1P61619 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.61■□□□□ 0.09
SEC61A1P61619 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SEC61A1P61619 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SEC61A1P61619 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEC61A1P61619 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.61■□□□□ 0.09
SEC61A1P61619 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SEC61A1P61619 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.61■□□□□ 0.09
SEC61A1P61619 FAM8A6P-201ENST00000407496 1135 ntBASIC15.61■□□□□ 0.09
SEC61A1P61619 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEC61A1P61619 MCCD1P1-208ENST00000445732 328 ntBASIC15.61■□□□□ 0.09
SEC61A1P61619 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.61■□□□□ 0.09
SEC61A1P61619 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SEC61A1P61619 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.61■□□□□ 0.09
SEC61A1P61619 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SEC61A1P61619 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.61■□□□□ 0.09
SEC61A1P61619 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.61■□□□□ 0.09
SEC61A1P61619 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.61■□□□□ 0.09
SEC61A1P61619 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.61■□□□□ 0.09
SEC61A1P61619 AC068587.9-201ENST00000641814 219 ntBASIC15.61■□□□□ 0.09
SEC61A1P61619 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SEC61A1P61619 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEC61A1P61619 MTMR9LP-203ENST00000426597 1545 ntBASIC15.61■□□□□ 0.09
SEC61A1P61619 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEC61A1P61619 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SEC61A1P61619 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEC61A1P61619 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.61■□□□□ 0.09
SEC61A1P61619 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SEC61A1P61619 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.61■□□□□ 0.09
SEC61A1P61619 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SEC61A1P61619 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEC61A1P61619 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEC61A1P61619 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEC61A1P61619 AL391005.1-201ENST00000623953 2435 ntBASIC15.6■□□□□ 0.09
SEC61A1P61619 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SEC61A1P61619 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SEC61A1P61619 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.6■□□□□ 0.09
SEC61A1P61619 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SEC61A1P61619 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.6■□□□□ 0.09
SEC61A1P61619 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SEC61A1P61619 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SEC61A1P61619 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.6■□□□□ 0.09
SEC61A1P61619 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.6■□□□□ 0.09
SEC61A1P61619 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SEC61A1P61619 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SEC61A1P61619 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
SEC61A1P61619 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.6■□□□□ 0.09
SEC61A1P61619 RCC2P3-201ENST00000418112 1537 ntBASIC15.6■□□□□ 0.09
SEC61A1P61619 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.6■□□□□ 0.09
SEC61A1P61619 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SEC61A1P61619 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.6■□□□□ 0.09
SEC61A1P61619 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SEC61A1P61619 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.6■□□□□ 0.09
SEC61A1P61619 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.6■□□□□ 0.09
SEC61A1P61619 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SEC61A1P61619 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.6■□□□□ 0.09
SEC61A1P61619 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.6■□□□□ 0.09
SEC61A1P61619 KRT18P38-201ENST00000449496 1282 ntBASIC15.6■□□□□ 0.09
SEC61A1P61619 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.6■□□□□ 0.09
SEC61A1P61619 GCSHP2-201ENST00000560971 527 ntBASIC15.6■□□□□ 0.09
SEC61A1P61619 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.6■□□□□ 0.09
SEC61A1P61619 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
SEC61A1P61619 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
SEC61A1P61619 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SEC61A1P61619 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SEC61A1P61619 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SEC61A1P61619 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SEC61A1P61619 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SEC61A1P61619 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SEC61A1P61619 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SEC61A1P61619 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SEC61A1P61619 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.6■□□□□ 0.09
SEC61A1P61619 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.6■□□□□ 0.09
SEC61A1P61619 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SEC61A1P61619 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SEC61A1P61619 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms