Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDKN2DP55273 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CDKN2DP55273 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDKN2DP55273 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.58■□□□□ 0.4
CDKN2DP55273 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CDKN2DP55273 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDKN2DP55273 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDKN2DP55273 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKN2DP55273 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CDKN2DP55273 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKN2DP55273 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKN2DP55273 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDKN2DP55273 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDKN2DP55273 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.57■□□□□ 0.4
CDKN2DP55273 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CDKN2DP55273 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKN2DP55273 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDKN2DP55273 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKN2DP55273 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.57■□□□□ 0.4
CDKN2DP55273 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKN2DP55273 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.57■□□□□ 0.4
CDKN2DP55273 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKN2DP55273 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.57■□□□□ 0.4
CDKN2DP55273 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CDKN2DP55273 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.57■□□□□ 0.4
CDKN2DP55273 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.57■□□□□ 0.4
CDKN2DP55273 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKN2DP55273 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDKN2DP55273 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.57■□□□□ 0.4
CDKN2DP55273 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDKN2DP55273 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CDKN2DP55273 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKN2DP55273 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CDKN2DP55273 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.57■□□□□ 0.4
CDKN2DP55273 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKN2DP55273 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CDKN2DP55273 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDKN2DP55273 AL023806.1-201ENST00000603994 1649 ntBASIC17.57■□□□□ 0.4
CDKN2DP55273 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CDKN2DP55273 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CDKN2DP55273 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDKN2DP55273 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CDKN2DP55273 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CDKN2DP55273 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDKN2DP55273 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKN2DP55273 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKN2DP55273 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKN2DP55273 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKN2DP55273 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDKN2DP55273 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKN2DP55273 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKN2DP55273 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDKN2DP55273 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKN2DP55273 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKN2DP55273 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CDKN2DP55273 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKN2DP55273 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.56■□□□□ 0.4
CDKN2DP55273 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.56■□□□□ 0.4
CDKN2DP55273 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.56■□□□□ 0.4
CDKN2DP55273 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.56■□□□□ 0.4
CDKN2DP55273 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDKN2DP55273 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.56■□□□□ 0.4
CDKN2DP55273 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKN2DP55273 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDKN2DP55273 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.56■□□□□ 0.4
CDKN2DP55273 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
CDKN2DP55273 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDKN2DP55273 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKN2DP55273 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDKN2DP55273 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
CDKN2DP55273 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDKN2DP55273 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDKN2DP55273 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKN2DP55273 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKN2DP55273 AL645929.1-201ENST00000420084 975 ntBASIC17.55■□□□□ 0.4
CDKN2DP55273 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.55■□□□□ 0.4
CDKN2DP55273 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.55■□□□□ 0.4
CDKN2DP55273 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKN2DP55273 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKN2DP55273 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.55■□□□□ 0.4
CDKN2DP55273 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.55■□□□□ 0.4
CDKN2DP55273 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDKN2DP55273 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDKN2DP55273 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.55■□□□□ 0.4
CDKN2DP55273 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CDKN2DP55273 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDKN2DP55273 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKN2DP55273 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.55■□□□□ 0.4
CDKN2DP55273 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.55■□□□□ 0.4
CDKN2DP55273 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKN2DP55273 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKN2DP55273 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDKN2DP55273 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKN2DP55273 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDKN2DP55273 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CDKN2DP55273 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDKN2DP55273 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.54■□□□□ 0.4
CDKN2DP55273 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDKN2DP55273 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.54■□□□□ 0.4
CDKN2DP55273 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms