Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AC103564.2-201ENST00000432853 1299 ntBASIC13.03□□□□□ -0.32
APOC4P55056 ABCD1P5-201ENST00000445663 754 ntBASIC13.03□□□□□ -0.32
APOC4P55056 AC079781.3-201ENST00000449110 356 ntBASIC13.03□□□□□ -0.32
APOC4P55056 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOC4P55056 AP002469.2-201ENST00000531724 424 ntBASIC13.03□□□□□ -0.32
APOC4P55056 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.03□□□□□ -0.32
APOC4P55056 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOC4P55056 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC4P55056 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOC4P55056 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
APOC4P55056 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOC4P55056 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOC4P55056 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC13.03□□□□□ -0.32
APOC4P55056 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC4P55056 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC13.03□□□□□ -0.32
APOC4P55056 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC4P55056 AC093677.2-201ENST00000600169 1863 ntBASIC13.03□□□□□ -0.32
APOC4P55056 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.03□□□□□ -0.32
APOC4P55056 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC4P55056 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.03□□□□□ -0.32
APOC4P55056 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.03□□□□□ -0.32
APOC4P55056 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC4P55056 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC4P55056 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOC4P55056 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOC4P55056 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.03□□□□□ -0.32
APOC4P55056 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC4P55056 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.03□□□□□ -0.32
APOC4P55056 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC13.03□□□□□ -0.32
APOC4P55056 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
APOC4P55056 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC4P55056 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOC4P55056 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOC4P55056 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
APOC4P55056 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.02□□□□□ -0.32
APOC4P55056 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOC4P55056 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC13.02□□□□□ -0.32
APOC4P55056 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOC4P55056 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOC4P55056 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOC4P55056 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOC4P55056 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
APOC4P55056 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC13.02□□□□□ -0.32
APOC4P55056 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
APOC4P55056 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOC4P55056 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOC4P55056 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC13.02□□□□□ -0.32
APOC4P55056 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOC4P55056 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC4P55056 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC4P55056 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC4P55056 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.02□□□□□ -0.33
APOC4P55056 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
APOC4P55056 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.02□□□□□ -0.33
APOC4P55056 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC4P55056 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC4P55056 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC4P55056 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOC4P55056 AC007967.3-201ENST00000434308 558 ntBASIC13.02□□□□□ -0.33
APOC4P55056 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC13.02□□□□□ -0.33
APOC4P55056 AC122714.2-201ENST00000502787 707 ntBASIC13.02□□□□□ -0.33
APOC4P55056 AC106795.1-205ENST00000512851 1056 ntBASIC13.02□□□□□ -0.33
APOC4P55056 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
APOC4P55056 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.02□□□□□ -0.33
APOC4P55056 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.02□□□□□ -0.33
APOC4P55056 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.02□□□□□ -0.33
APOC4P55056 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.02□□□□□ -0.33
APOC4P55056 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOC4P55056 MTDHP3-201ENST00000594186 672 ntBASIC13.02□□□□□ -0.33
APOC4P55056 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.02□□□□□ -0.33
APOC4P55056 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.02□□□□□ -0.33
APOC4P55056 AL355877.3-201ENST00000622820 899 ntBASIC13.02□□□□□ -0.33
APOC4P55056 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
APOC4P55056 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.02□□□□□ -0.33
APOC4P55056 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.02□□□□□ -0.33
APOC4P55056 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
APOC4P55056 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
APOC4P55056 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
APOC4P55056 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOC4P55056 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC4P55056 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC4P55056 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.02□□□□□ -0.33
APOC4P55056 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
APOC4P55056 POR-209ENST00000439269 1858 ntTSL 2 BASIC13.02□□□□□ -0.33
APOC4P55056 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC4P55056 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC4P55056 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC4P55056 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC4P55056 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC13.01□□□□□ -0.33
APOC4P55056 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC13.01□□□□□ -0.33
APOC4P55056 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
APOC4P55056 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC4P55056 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
APOC4P55056 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC13.01□□□□□ -0.33
APOC4P55056 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC13.01□□□□□ -0.33
APOC4P55056 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC4P55056 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC4P55056 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC4P55056 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.01□□□□□ -0.33
APOC4P55056 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms