Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC25.26■■□□□ 1.63
CLTCL1P53675 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
CLTCL1P53675 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
CLTCL1P53675 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC25.26■■□□□ 1.63
CLTCL1P53675 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC25.26■■□□□ 1.63
CLTCL1P53675 ADH5P3-201ENST00000433842 1137 ntBASIC25.26■■□□□ 1.63
CLTCL1P53675 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC25.26■■□□□ 1.63
CLTCL1P53675 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC25.26■■□□□ 1.63
CLTCL1P53675 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CLTCL1P53675 AC027796.2-201ENST00000575326 344 ntBASIC25.26■■□□□ 1.63
CLTCL1P53675 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC25.26■■□□□ 1.63
CLTCL1P53675 AL355385.1-201ENST00000606123 409 ntBASIC25.26■■□□□ 1.63
CLTCL1P53675 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
CLTCL1P53675 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
CLTCL1P53675 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC25.26■■□□□ 1.63
CLTCL1P53675 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
CLTCL1P53675 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CLTCL1P53675 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CLTCL1P53675 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC25.25■■□□□ 1.63
CLTCL1P53675 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CLTCL1P53675 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CLTCL1P53675 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
CLTCL1P53675 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CLTCL1P53675 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC25.25■■□□□ 1.63
CLTCL1P53675 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC25.25■■□□□ 1.63
CLTCL1P53675 CFL1-202ENST00000524553 860 ntTSL 2 BASIC25.25■■□□□ 1.63
CLTCL1P53675 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC25.25■■□□□ 1.63
CLTCL1P53675 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC25.25■■□□□ 1.63
CLTCL1P53675 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC25.25■■□□□ 1.63
CLTCL1P53675 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CLTCL1P53675 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CLTCL1P53675 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CLTCL1P53675 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CLTCL1P53675 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC25.24■■□□□ 1.63
CLTCL1P53675 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
CLTCL1P53675 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CLTCL1P53675 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC25.24■■□□□ 1.63
CLTCL1P53675 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CLTCL1P53675 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CLTCL1P53675 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CLTCL1P53675 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CLTCL1P53675 PTCHD3P3-201ENST00000403073 906 ntBASIC25.24■■□□□ 1.63
CLTCL1P53675 IGHV3-52-201ENST00000519770 353 ntBASIC25.24■■□□□ 1.63
CLTCL1P53675 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
CLTCL1P53675 KRT19P2-202ENST00000557173 1012 ntBASIC25.24■■□□□ 1.63
CLTCL1P53675 MIR4469-201ENST00000583919 79 ntBASIC25.24■■□□□ 1.63
CLTCL1P53675 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CLTCL1P53675 KRT18P55-202ENST00000578578 1546 ntBASIC25.24■■□□□ 1.63
CLTCL1P53675 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC25.23■■□□□ 1.63
CLTCL1P53675 STK4-201ENST00000372801 2038 ntTSL 2 BASIC25.23■■□□□ 1.63
CLTCL1P53675 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CLTCL1P53675 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CLTCL1P53675 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CLTCL1P53675 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CLTCL1P53675 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC25.23■■□□□ 1.63
CLTCL1P53675 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC25.23■■□□□ 1.63
CLTCL1P53675 CYB561-216ENST00000582297 897 ntTSL 3 BASIC25.23■■□□□ 1.63
CLTCL1P53675 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC25.23■■□□□ 1.63
CLTCL1P53675 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC25.23■■□□□ 1.63
CLTCL1P53675 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CLTCL1P53675 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CLTCL1P53675 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CLTCL1P53675 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CLTCL1P53675 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC25.23■■□□□ 1.63
CLTCL1P53675 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC25.23■■□□□ 1.63
CLTCL1P53675 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
CLTCL1P53675 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CLTCL1P53675 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CLTCL1P53675 METTL26-205ENST00000397666 726 ntTSL 2 BASIC25.23■■□□□ 1.63
CLTCL1P53675 MKNK2P1-201ENST00000437526 628 ntBASIC25.23■■□□□ 1.63
CLTCL1P53675 RHOQP3-201ENST00000437982 621 ntBASIC25.23■■□□□ 1.63
CLTCL1P53675 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CLTCL1P53675 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC25.23■■□□□ 1.63
CLTCL1P53675 C20orf181-201ENST00000623918 480 ntBASIC25.23■■□□□ 1.63
CLTCL1P53675 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CLTCL1P53675 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CLTCL1P53675 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC25.22■■□□□ 1.63
CLTCL1P53675 FLJ13224-201ENST00000313737 1514 ntBASIC25.22■■□□□ 1.63
CLTCL1P53675 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC25.22■■□□□ 1.63
CLTCL1P53675 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
CLTCL1P53675 ELL2P1-201ENST00000413990 1906 ntBASIC25.22■■□□□ 1.63
CLTCL1P53675 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CLTCL1P53675 AC254562.1-201ENST00000417586 456 ntBASIC25.22■■□□□ 1.63
CLTCL1P53675 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
CLTCL1P53675 CD63-210ENST00000550776 870 ntTSL 5 BASIC25.22■■□□□ 1.63
CLTCL1P53675 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC25.22■■□□□ 1.63
CLTCL1P53675 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC25.22■■□□□ 1.63
CLTCL1P53675 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CLTCL1P53675 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC25.22■■□□□ 1.63
CLTCL1P53675 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC25.22■■□□□ 1.63
CLTCL1P53675 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CLTCL1P53675 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
CLTCL1P53675 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC25.21■■□□□ 1.63
CLTCL1P53675 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
CLTCL1P53675 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CLTCL1P53675 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
CLTCL1P53675 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CLTCL1P53675 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
CLTCL1P53675 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CLTCL1P53675 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms