Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LBX1P52954 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC19.9■□□□□ 0.78
LBX1P52954 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC19.9■□□□□ 0.78
LBX1P52954 MIR4453-201ENST00000584019 89 ntBASIC19.9■□□□□ 0.78
LBX1P52954 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.9■□□□□ 0.78
LBX1P52954 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
LBX1P52954 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LBX1P52954 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LBX1P52954 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LBX1P52954 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LBX1P52954 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.9■□□□□ 0.78
LBX1P52954 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LBX1P52954 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
LBX1P52954 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
LBX1P52954 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LBX1P52954 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
LBX1P52954 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.9■□□□□ 0.78
LBX1P52954 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.9■□□□□ 0.78
LBX1P52954 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LBX1P52954 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LBX1P52954 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LBX1P52954 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LBX1P52954 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LBX1P52954 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LBX1P52954 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
LBX1P52954 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.89■□□□□ 0.77
LBX1P52954 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.89■□□□□ 0.77
LBX1P52954 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LBX1P52954 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC19.89■□□□□ 0.77
LBX1P52954 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LBX1P52954 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC19.89■□□□□ 0.77
LBX1P52954 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.89■□□□□ 0.77
LBX1P52954 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
LBX1P52954 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LBX1P52954 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.89■□□□□ 0.77
LBX1P52954 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LBX1P52954 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.89■□□□□ 0.77
LBX1P52954 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LBX1P52954 TCF3P1-201ENST00000423021 1937 ntBASIC19.88■□□□□ 0.77
LBX1P52954 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LBX1P52954 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
LBX1P52954 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
LBX1P52954 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.88■□□□□ 0.77
LBX1P52954 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LBX1P52954 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LBX1P52954 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LBX1P52954 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LBX1P52954 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LBX1P52954 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LBX1P52954 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
LBX1P52954 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
LBX1P52954 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.88■□□□□ 0.77
LBX1P52954 ALG1L8P-201ENST00000533887 760 ntBASIC19.88■□□□□ 0.77
LBX1P52954 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.88■□□□□ 0.77
LBX1P52954 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.88■□□□□ 0.77
LBX1P52954 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LBX1P52954 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
LBX1P52954 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
LBX1P52954 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LBX1P52954 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LBX1P52954 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LBX1P52954 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LBX1P52954 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LBX1P52954 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
LBX1P52954 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LBX1P52954 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LBX1P52954 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
LBX1P52954 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LBX1P52954 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.87■□□□□ 0.77
LBX1P52954 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.87■□□□□ 0.77
LBX1P52954 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LBX1P52954 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LBX1P52954 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.87■□□□□ 0.77
LBX1P52954 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LBX1P52954 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LBX1P52954 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LBX1P52954 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LBX1P52954 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LBX1P52954 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LBX1P52954 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LBX1P52954 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.87■□□□□ 0.77
LBX1P52954 MPV17-208ENST00000405076 603 ntTSL 5 BASIC19.87■□□□□ 0.77
LBX1P52954 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.87■□□□□ 0.77
LBX1P52954 RPL28-204ENST00000431533 590 ntTSL 2 BASIC19.87■□□□□ 0.77
LBX1P52954 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.87■□□□□ 0.77
LBX1P52954 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC19.87■□□□□ 0.77
LBX1P52954 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.87■□□□□ 0.77
LBX1P52954 USB1-203ENST00000539737 1212 ntTSL 2 BASIC19.87■□□□□ 0.77
LBX1P52954 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
LBX1P52954 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LBX1P52954 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.87■□□□□ 0.77
LBX1P52954 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
LBX1P52954 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.87■□□□□ 0.77
LBX1P52954 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.87■□□□□ 0.77
LBX1P52954 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.87■□□□□ 0.77
LBX1P52954 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.87■□□□□ 0.77
LBX1P52954 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
LBX1P52954 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
LBX1P52954 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
LBX1P52954 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms