Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 PMS2P7-201ENST00000506558 1336 ntBASIC17.27■□□□□ 0.36
PDX1P52945 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PDX1P52945 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDX1P52945 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDX1P52945 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDX1P52945 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDX1P52945 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
PDX1P52945 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PDX1P52945 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDX1P52945 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
PDX1P52945 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.27■□□□□ 0.36
PDX1P52945 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PDX1P52945 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.27■□□□□ 0.36
PDX1P52945 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.27■□□□□ 0.36
PDX1P52945 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.27■□□□□ 0.36
PDX1P52945 AL390961.4-201ENST00000623958 2535 ntBASIC17.27■□□□□ 0.36
PDX1P52945 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PDX1P52945 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PDX1P52945 AP005117.1-201ENST00000584346 1413 ntBASIC17.27■□□□□ 0.35
PDX1P52945 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PDX1P52945 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
PDX1P52945 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
PDX1P52945 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PDX1P52945 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDX1P52945 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDX1P52945 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDX1P52945 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.26■□□□□ 0.35
PDX1P52945 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.26■□□□□ 0.35
PDX1P52945 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDX1P52945 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDX1P52945 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PDX1P52945 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.26■□□□□ 0.35
PDX1P52945 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.26■□□□□ 0.35
PDX1P52945 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.26■□□□□ 0.35
PDX1P52945 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDX1P52945 IGHV3-22-201ENST00000520721 359 ntBASIC17.26■□□□□ 0.35
PDX1P52945 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.26■□□□□ 0.35
PDX1P52945 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.26■□□□□ 0.35
PDX1P52945 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDX1P52945 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.26■□□□□ 0.35
PDX1P52945 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDX1P52945 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDX1P52945 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.26■□□□□ 0.35
PDX1P52945 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDX1P52945 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDX1P52945 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDX1P52945 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.26■□□□□ 0.35
PDX1P52945 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.26■□□□□ 0.35
PDX1P52945 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.26■□□□□ 0.35
PDX1P52945 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDX1P52945 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDX1P52945 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PDX1P52945 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDX1P52945 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDX1P52945 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PDX1P52945 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.26■□□□□ 0.35
PDX1P52945 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PDX1P52945 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDX1P52945 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.25■□□□□ 0.35
PDX1P52945 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDX1P52945 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.25■□□□□ 0.35
PDX1P52945 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDX1P52945 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.25■□□□□ 0.35
PDX1P52945 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDX1P52945 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.25■□□□□ 0.35
PDX1P52945 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDX1P52945 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDX1P52945 MIR1233-2-201ENST00000408138 82 ntBASIC17.25■□□□□ 0.35
PDX1P52945 MIR1233-1-201ENST00000408722 82 ntBASIC17.25■□□□□ 0.35
PDX1P52945 BX842568.4-201ENST00000421222 227 ntBASIC17.25■□□□□ 0.35
PDX1P52945 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.25■□□□□ 0.35
PDX1P52945 ABCD1P5-201ENST00000445663 754 ntBASIC17.25■□□□□ 0.35
PDX1P52945 AC145285.3-201ENST00000564603 959 ntBASIC17.25■□□□□ 0.35
PDX1P52945 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.25■□□□□ 0.35
PDX1P52945 TERC-201ENST00000602385 541 ntBASIC17.25■□□□□ 0.35
PDX1P52945 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.25■□□□□ 0.35
PDX1P52945 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDX1P52945 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDX1P52945 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDX1P52945 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDX1P52945 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDX1P52945 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDX1P52945 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
PDX1P52945 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDX1P52945 ZNF259P1-201ENST00000407656 1365 ntBASIC17.25■□□□□ 0.35
PDX1P52945 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDX1P52945 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PDX1P52945 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PDX1P52945 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PDX1P52945 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDX1P52945 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDX1P52945 AL354751.1-201ENST00000412768 1863 ntBASIC17.24■□□□□ 0.35
PDX1P52945 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PDX1P52945 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PDX1P52945 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDX1P52945 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PDX1P52945 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PDX1P52945 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PDX1P52945 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PDX1P52945 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms