Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC31.3■■■□□ 2.6
SMARCA2P51531 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC31.3■■■□□ 2.6
SMARCA2P51531 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SMARCA2P51531 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SMARCA2P51531 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
SMARCA2P51531 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC31.3■■■□□ 2.6
SMARCA2P51531 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SMARCA2P51531 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC31.3■■■□□ 2.6
SMARCA2P51531 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SMARCA2P51531 KRT18P32-201ENST00000424695 1287 ntBASIC31.3■■■□□ 2.6
SMARCA2P51531 GATB-205ENST00000508611 605 ntTSL 2 BASIC31.3■■■□□ 2.6
SMARCA2P51531 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC31.3■■■□□ 2.6
SMARCA2P51531 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
SMARCA2P51531 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SMARCA2P51531 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SMARCA2P51531 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC31.29■■■□□ 2.6
SMARCA2P51531 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
SMARCA2P51531 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC31.29■■■□□ 2.6
SMARCA2P51531 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
SMARCA2P51531 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC31.29■■■□□ 2.6
SMARCA2P51531 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SMARCA2P51531 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC31.29■■■□□ 2.6
SMARCA2P51531 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
SMARCA2P51531 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SMARCA2P51531 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SMARCA2P51531 AC007274.1-201ENST00000439805 662 ntBASIC31.29■■■□□ 2.6
SMARCA2P51531 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
SMARCA2P51531 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SMARCA2P51531 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC31.29■■■□□ 2.6
SMARCA2P51531 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC31.29■■■□□ 2.6
SMARCA2P51531 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SMARCA2P51531 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC31.29■■■□□ 2.6
SMARCA2P51531 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SMARCA2P51531 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC31.28■■■□□ 2.6
SMARCA2P51531 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC31.28■■■□□ 2.6
SMARCA2P51531 VMA21-202ENST00000370361 693 ntTSL 5 BASIC31.28■■■□□ 2.6
SMARCA2P51531 AC055876.3-201ENST00000431496 288 ntBASIC31.28■■■□□ 2.6
SMARCA2P51531 UGT1A2P-201ENST00000454886 866 ntBASIC31.28■■■□□ 2.6
SMARCA2P51531 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC31.28■■■□□ 2.6
SMARCA2P51531 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC31.28■■■□□ 2.6
SMARCA2P51531 AC138649.4-201ENST00000612222 287 ntBASIC31.28■■■□□ 2.6
SMARCA2P51531 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC31.28■■■□□ 2.6
SMARCA2P51531 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
SMARCA2P51531 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SMARCA2P51531 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC31.28■■■□□ 2.6
SMARCA2P51531 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC31.28■■■□□ 2.6
SMARCA2P51531 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SMARCA2P51531 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SMARCA2P51531 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SMARCA2P51531 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SMARCA2P51531 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
SMARCA2P51531 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SMARCA2P51531 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SMARCA2P51531 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
SMARCA2P51531 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SMARCA2P51531 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC31.27■■■□□ 2.6
SMARCA2P51531 RN7SL589P-201ENST00000481268 310 ntBASIC31.27■■■□□ 2.6
SMARCA2P51531 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC31.27■■■□□ 2.6
SMARCA2P51531 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SMARCA2P51531 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
SMARCA2P51531 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.6
SMARCA2P51531 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
SMARCA2P51531 NABP1-203ENST00000409510 843 ntTSL 5 BASIC31.26■■■□□ 2.6
SMARCA2P51531 AC140658.5-201ENST00000438532 169 ntBASIC31.26■■■□□ 2.6
SMARCA2P51531 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC31.26■■■□□ 2.6
SMARCA2P51531 FAM185BP-201ENST00000443595 716 ntBASIC31.26■■■□□ 2.6
SMARCA2P51531 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC31.26■■■□□ 2.6
SMARCA2P51531 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.6
SMARCA2P51531 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.6
SMARCA2P51531 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
SMARCA2P51531 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
SMARCA2P51531 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
SMARCA2P51531 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
SMARCA2P51531 AC002056.1-201ENST00000395613 760 ntBASIC31.26■■■□□ 2.59
SMARCA2P51531 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC31.26■■■□□ 2.59
SMARCA2P51531 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC31.26■■■□□ 2.59
SMARCA2P51531 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC31.26■■■□□ 2.59
SMARCA2P51531 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC31.26■■■□□ 2.59
SMARCA2P51531 AL513480.1-201ENST00000451731 511 ntBASIC31.26■■■□□ 2.59
SMARCA2P51531 AC069335.1-201ENST00000489972 472 ntBASIC31.26■■■□□ 2.59
SMARCA2P51531 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC31.26■■■□□ 2.59
SMARCA2P51531 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC31.26■■■□□ 2.59
SMARCA2P51531 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SMARCA2P51531 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SMARCA2P51531 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
SMARCA2P51531 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SMARCA2P51531 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SMARCA2P51531 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SMARCA2P51531 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC31.25■■■□□ 2.59
SMARCA2P51531 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
SMARCA2P51531 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SMARCA2P51531 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SMARCA2P51531 KLF2P3-201ENST00000451977 1087 ntBASIC31.25■■■□□ 2.59
SMARCA2P51531 OARD1-208ENST00000469104 704 ntTSL 2 BASIC31.25■■■□□ 2.59
SMARCA2P51531 MEIS3P1-201ENST00000495167 958 ntBASIC31.25■■■□□ 2.59
SMARCA2P51531 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SMARCA2P51531 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC31.25■■■□□ 2.59
SMARCA2P51531 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC31.25■■■□□ 2.59
SMARCA2P51531 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC31.25■■■□□ 2.59
SMARCA2P51531 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC31.25■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms