Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GRIA1P42261 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GRIA1P42261 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GRIA1P42261 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
GRIA1P42261 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GRIA1P42261 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GRIA1P42261 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.03■□□□□ 0.48
GRIA1P42261 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GRIA1P42261 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
GRIA1P42261 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GRIA1P42261 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GRIA1P42261 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
GRIA1P42261 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GRIA1P42261 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.03■□□□□ 0.48
GRIA1P42261 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GRIA1P42261 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GRIA1P42261 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.03■□□□□ 0.48
GRIA1P42261 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GRIA1P42261 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
GRIA1P42261 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GRIA1P42261 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GRIA1P42261 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GRIA1P42261 AC068472.1-201ENST00000474589 881 ntBASIC18.03■□□□□ 0.48
GRIA1P42261 AC063952.2-201ENST00000498792 1227 ntBASIC18.03■□□□□ 0.48
GRIA1P42261 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GRIA1P42261 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.03■□□□□ 0.48
GRIA1P42261 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.03■□□□□ 0.48
GRIA1P42261 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
GRIA1P42261 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GRIA1P42261 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.03■□□□□ 0.48
GRIA1P42261 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
GRIA1P42261 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.03■□□□□ 0.48
GRIA1P42261 AC116407.2-201ENST00000613639 860 ntBASIC18.03■□□□□ 0.48
GRIA1P42261 AC083849.1-201ENST00000615227 514 ntBASIC18.03■□□□□ 0.48
GRIA1P42261 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GRIA1P42261 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
GRIA1P42261 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
GRIA1P42261 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GRIA1P42261 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.03■□□□□ 0.48
GRIA1P42261 AL138688.1-201ENST00000624851 1594 ntBASIC18.03■□□□□ 0.48
GRIA1P42261 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GRIA1P42261 AC138932.1-201ENST00000534164 6830 ntBASIC18.03■□□□□ 0.48
GRIA1P42261 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GRIA1P42261 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GRIA1P42261 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GRIA1P42261 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
GRIA1P42261 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.03■□□□□ 0.48
GRIA1P42261 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.03■□□□□ 0.48
GRIA1P42261 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GRIA1P42261 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GRIA1P42261 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
GRIA1P42261 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
GRIA1P42261 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.03■□□□□ 0.48
GRIA1P42261 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GRIA1P42261 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GRIA1P42261 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
GRIA1P42261 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
GRIA1P42261 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
GRIA1P42261 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GRIA1P42261 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GRIA1P42261 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.02■□□□□ 0.48
GRIA1P42261 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GRIA1P42261 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GRIA1P42261 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GRIA1P42261 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GRIA1P42261 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
GRIA1P42261 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GRIA1P42261 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.02■□□□□ 0.48
GRIA1P42261 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.02■□□□□ 0.48
GRIA1P42261 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
GRIA1P42261 AP001094.4-201ENST00000579008 2176 ntBASIC18.02■□□□□ 0.48
GRIA1P42261 GPR32P1-201ENST00000601788 811 ntBASIC18.02■□□□□ 0.48
GRIA1P42261 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
GRIA1P42261 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
GRIA1P42261 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GRIA1P42261 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
GRIA1P42261 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
GRIA1P42261 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
GRIA1P42261 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
GRIA1P42261 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
GRIA1P42261 AC022211.2-201ENST00000585075 2527 ntBASIC18.02■□□□□ 0.47
GRIA1P42261 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.47
GRIA1P42261 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
GRIA1P42261 AL023806.1-201ENST00000603994 1649 ntBASIC18.01■□□□□ 0.47
GRIA1P42261 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.01■□□□□ 0.47
GRIA1P42261 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
GRIA1P42261 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
GRIA1P42261 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GRIA1P42261 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.01■□□□□ 0.47
GRIA1P42261 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.01■□□□□ 0.47
GRIA1P42261 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.01■□□□□ 0.47
GRIA1P42261 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
GRIA1P42261 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GRIA1P42261 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
GRIA1P42261 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
GRIA1P42261 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GRIA1P42261 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
GRIA1P42261 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GRIA1P42261 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
GRIA1P42261 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms