Protein–RNA interactions for Protein: P40227

CCT6A, T-complex protein 1 subunit zeta, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6AP40227 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCT6AP40227 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCT6AP40227 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.13■□□□□ 0.81
CCT6AP40227 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCT6AP40227 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCT6AP40227 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCT6AP40227 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCT6AP40227 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCT6AP40227 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CCT6AP40227 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCT6AP40227 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCT6AP40227 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCT6AP40227 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCT6AP40227 TSSC2-201ENST00000450217 709 ntBASIC20.13■□□□□ 0.81
CCT6AP40227 RN7SL606P-201ENST00000472779 293 ntBASIC20.13■□□□□ 0.81
CCT6AP40227 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCT6AP40227 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCT6AP40227 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCT6AP40227 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCT6AP40227 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCT6AP40227 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCT6AP40227 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.13■□□□□ 0.81
CCT6AP40227 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCT6AP40227 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
CCT6AP40227 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCT6AP40227 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.12■□□□□ 0.81
CCT6AP40227 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCT6AP40227 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCT6AP40227 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.12■□□□□ 0.81
CCT6AP40227 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CCT6AP40227 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.12■□□□□ 0.81
CCT6AP40227 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CCT6AP40227 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.12■□□□□ 0.81
CCT6AP40227 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.12■□□□□ 0.81
CCT6AP40227 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCT6AP40227 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCT6AP40227 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCT6AP40227 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CCT6AP40227 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCT6AP40227 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.12■□□□□ 0.81
CCT6AP40227 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.12■□□□□ 0.81
CCT6AP40227 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.12■□□□□ 0.81
CCT6AP40227 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCT6AP40227 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCT6AP40227 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCT6AP40227 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCT6AP40227 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCT6AP40227 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CCT6AP40227 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCT6AP40227 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCT6AP40227 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCT6AP40227 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CCT6AP40227 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCT6AP40227 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CCT6AP40227 AC012317.2-201ENST00000623305 2251 ntBASIC20.11■□□□□ 0.81
CCT6AP40227 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCT6AP40227 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCT6AP40227 KRT8P47-201ENST00000604727 1398 ntBASIC20.11■□□□□ 0.81
CCT6AP40227 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCT6AP40227 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCT6AP40227 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCT6AP40227 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCT6AP40227 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.11■□□□□ 0.81
CCT6AP40227 SLC25A6P5-201ENST00000435663 894 ntBASIC20.11■□□□□ 0.81
CCT6AP40227 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CCT6AP40227 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.11■□□□□ 0.81
CCT6AP40227 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CCT6AP40227 AC069148.1-201ENST00000608741 768 ntBASIC20.11■□□□□ 0.81
CCT6AP40227 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.11■□□□□ 0.81
CCT6AP40227 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.11■□□□□ 0.81
CCT6AP40227 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.11■□□□□ 0.81
CCT6AP40227 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CCT6AP40227 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCT6AP40227 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.11■□□□□ 0.81
CCT6AP40227 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CCT6AP40227 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.11■□□□□ 0.81
CCT6AP40227 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.1■□□□□ 0.81
CCT6AP40227 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.1■□□□□ 0.81
CCT6AP40227 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCT6AP40227 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCT6AP40227 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCT6AP40227 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CCT6AP40227 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CCT6AP40227 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCT6AP40227 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CCT6AP40227 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.1■□□□□ 0.81
CCT6AP40227 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCT6AP40227 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.1■□□□□ 0.81
CCT6AP40227 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCT6AP40227 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.1■□□□□ 0.81
CCT6AP40227 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCT6AP40227 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CCT6AP40227 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCT6AP40227 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCT6AP40227 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CCT6AP40227 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCT6AP40227 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.1■□□□□ 0.81
CCT6AP40227 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCT6AP40227 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCT6AP40227 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms