Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 MIR564-202ENST00000385049 94 ntBASIC14.68□□□□□ -0.06
SNCAP37840 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.68□□□□□ -0.06
SNCAP37840 AC008040.2-201ENST00000461049 708 ntBASIC14.68□□□□□ -0.06
SNCAP37840 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.68□□□□□ -0.06
SNCAP37840 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.68□□□□□ -0.06
SNCAP37840 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SNCAP37840 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.68□□□□□ -0.06
SNCAP37840 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.68□□□□□ -0.06
SNCAP37840 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNCAP37840 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNCAP37840 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SNCAP37840 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
SNCAP37840 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SNCAP37840 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SNCAP37840 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SNCAP37840 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNCAP37840 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNCAP37840 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNCAP37840 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SNCAP37840 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNCAP37840 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNCAP37840 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNCAP37840 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNCAP37840 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.67□□□□□ -0.06
SNCAP37840 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SNCAP37840 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNCAP37840 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SNCAP37840 DOC2GP-204ENST00000639052 2548 ntBASIC14.67□□□□□ -0.06
SNCAP37840 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SNCAP37840 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SNCAP37840 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SNCAP37840 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNCAP37840 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SNCAP37840 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNCAP37840 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SNCAP37840 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNCAP37840 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.67□□□□□ -0.06
SNCAP37840 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.67□□□□□ -0.06
SNCAP37840 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNCAP37840 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNCAP37840 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.67□□□□□ -0.06
SNCAP37840 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNCAP37840 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.67□□□□□ -0.06
SNCAP37840 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SNCAP37840 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SNCAP37840 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.67□□□□□ -0.06
SNCAP37840 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SNCAP37840 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SNCAP37840 SLC25A1P4-201ENST00000567977 778 ntBASIC14.67□□□□□ -0.06
SNCAP37840 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.67□□□□□ -0.06
SNCAP37840 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.67□□□□□ -0.06
SNCAP37840 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.67□□□□□ -0.06
SNCAP37840 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
SNCAP37840 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNCAP37840 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNCAP37840 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNCAP37840 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNCAP37840 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SNCAP37840 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
SNCAP37840 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNCAP37840 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SNCAP37840 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SNCAP37840 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNCAP37840 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.67□□□□□ -0.06
SNCAP37840 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNCAP37840 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.67□□□□□ -0.06
SNCAP37840 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.67□□□□□ -0.06
SNCAP37840 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SNCAP37840 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.67□□□□□ -0.06
SNCAP37840 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SNCAP37840 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.67□□□□□ -0.06
SNCAP37840 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SNCAP37840 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.66□□□□□ -0.06
SNCAP37840 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.66□□□□□ -0.06
SNCAP37840 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.66□□□□□ -0.06
SNCAP37840 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SNCAP37840 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SNCAP37840 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.66□□□□□ -0.06
SNCAP37840 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SNCAP37840 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
SNCAP37840 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 FAM197Y1-201ENST00000421178 764 ntBASIC14.66□□□□□ -0.06
SNCAP37840 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SNCAP37840 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.66□□□□□ -0.06
SNCAP37840 FAM201B-201ENST00000458407 597 ntBASIC14.66□□□□□ -0.06
SNCAP37840 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms