Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN1P35523 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLCN1P35523 LINC02228-204ENST00000642115 2962 ntBASIC20.28■□□□□ 0.84
CLCN1P35523 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.27■□□□□ 0.84
CLCN1P35523 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.27■□□□□ 0.84
CLCN1P35523 AL135905.2-201ENST00000584934 1404 ntBASIC20.27■□□□□ 0.84
CLCN1P35523 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
CLCN1P35523 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC20.27■□□□□ 0.84
CLCN1P35523 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.27■□□□□ 0.84
CLCN1P35523 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CLCN1P35523 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN1P35523 MYB-201ENST00000316528 3571 ntTSL 5 BASIC20.27■□□□□ 0.84
CLCN1P35523 MYB-241ENST00000616088 3573 ntTSL 5 BASIC20.27■□□□□ 0.84
CLCN1P35523 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC20.27■□□□□ 0.84
CLCN1P35523 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN1P35523 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN1P35523 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN1P35523 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CLCN1P35523 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN1P35523 RPS2P55-201ENST00000397318 883 ntBASIC20.27■□□□□ 0.84
CLCN1P35523 B3GAT3P1-201ENST00000471720 806 ntBASIC20.27■□□□□ 0.84
CLCN1P35523 AC107956.1-201ENST00000494359 873 ntBASIC20.27■□□□□ 0.84
CLCN1P35523 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.27■□□□□ 0.84
CLCN1P35523 MIR6786-201ENST00000616843 113 ntBASIC20.27■□□□□ 0.84
CLCN1P35523 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN1P35523 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCN1P35523 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
CLCN1P35523 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC20.27■□□□□ 0.83
CLCN1P35523 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLCN1P35523 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
CLCN1P35523 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.27■□□□□ 0.83
CLCN1P35523 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN1P35523 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN1P35523 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.26■□□□□ 0.83
CLCN1P35523 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN1P35523 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN1P35523 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN1P35523 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CLCN1P35523 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN1P35523 PRSS44-201ENST00000515154 1146 ntBASIC20.26■□□□□ 0.83
CLCN1P35523 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.26■□□□□ 0.83
CLCN1P35523 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CLCN1P35523 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.26■□□□□ 0.83
CLCN1P35523 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.26■□□□□ 0.83
CLCN1P35523 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.26■□□□□ 0.83
CLCN1P35523 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.26■□□□□ 0.83
CLCN1P35523 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC20.26■□□□□ 0.83
CLCN1P35523 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN1P35523 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.26■□□□□ 0.83
CLCN1P35523 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.26■□□□□ 0.83
CLCN1P35523 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN1P35523 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN1P35523 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20.26■□□□□ 0.83
CLCN1P35523 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN1P35523 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN1P35523 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCN1P35523 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC20.25■□□□□ 0.83
CLCN1P35523 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN1P35523 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN1P35523 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.25■□□□□ 0.83
CLCN1P35523 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CLCN1P35523 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN1P35523 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN1P35523 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN1P35523 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN1P35523 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
CLCN1P35523 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.25■□□□□ 0.83
CLCN1P35523 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.25■□□□□ 0.83
CLCN1P35523 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.25■□□□□ 0.83
CLCN1P35523 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CLCN1P35523 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN1P35523 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN1P35523 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCN1P35523 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.25■□□□□ 0.83
CLCN1P35523 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.25■□□□□ 0.83
CLCN1P35523 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
CLCN1P35523 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC20.24■□□□□ 0.83
CLCN1P35523 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN1P35523 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN1P35523 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CLCN1P35523 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN1P35523 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CLCN1P35523 MTMR9LP-203ENST00000426597 1545 ntBASIC20.24■□□□□ 0.83
CLCN1P35523 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN1P35523 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN1P35523 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CLCN1P35523 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
CLCN1P35523 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.24■□□□□ 0.83
CLCN1P35523 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.24■□□□□ 0.83
CLCN1P35523 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CLCN1P35523 AC233702.5-201ENST00000584107 538 ntBASIC20.24■□□□□ 0.83
CLCN1P35523 Z99916.2-201ENST00000604037 246 ntBASIC20.24■□□□□ 0.83
CLCN1P35523 AC113410.3-201ENST00000623366 203 ntBASIC20.24■□□□□ 0.83
CLCN1P35523 AC079416.2-201ENST00000625035 1193 ntBASIC20.24■□□□□ 0.83
CLCN1P35523 MYC-208ENST00000641036 567 ntBASIC20.24■□□□□ 0.83
CLCN1P35523 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN1P35523 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLCN1P35523 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
CLCN1P35523 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.24■□□□□ 0.83
CLCN1P35523 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms