Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD28P10747 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CD28P10747 SART3-203ENST00000546611 1184 ntBASIC13.91□□□□□ -0.18
CD28P10747 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.91□□□□□ -0.18
CD28P10747 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD28P10747 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CD28P10747 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD28P10747 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.91□□□□□ -0.18
CD28P10747 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD28P10747 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD28P10747 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD28P10747 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD28P10747 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CD28P10747 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CD28P10747 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD28P10747 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CD28P10747 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.91□□□□□ -0.18
CD28P10747 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC13.91□□□□□ -0.18
CD28P10747 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC13.91□□□□□ -0.18
CD28P10747 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC13.91□□□□□ -0.18
CD28P10747 AC132938.6-201ENST00000623828 1655 ntBASIC13.91□□□□□ -0.18
CD28P10747 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC13.91□□□□□ -0.18
CD28P10747 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD28P10747 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD28P10747 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CD28P10747 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.9□□□□□ -0.18
CD28P10747 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.9□□□□□ -0.18
CD28P10747 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD28P10747 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC13.9□□□□□ -0.18
CD28P10747 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD28P10747 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC13.9□□□□□ -0.18
CD28P10747 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.9□□□□□ -0.18
CD28P10747 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CD28P10747 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC13.9□□□□□ -0.18
CD28P10747 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.9□□□□□ -0.18
CD28P10747 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CD28P10747 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CD28P10747 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD28P10747 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CD28P10747 MIR940-201ENST00000401276 94 ntBASIC13.9□□□□□ -0.18
CD28P10747 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CD28P10747 RPS2P1-201ENST00000434010 821 ntBASIC13.9□□□□□ -0.18
CD28P10747 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.9□□□□□ -0.18
CD28P10747 RPL13AP23-201ENST00000480739 586 ntBASIC13.9□□□□□ -0.18
CD28P10747 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.9□□□□□ -0.18
CD28P10747 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.9□□□□□ -0.18
CD28P10747 AC021087.4-201ENST00000563761 564 ntBASIC13.9□□□□□ -0.18
CD28P10747 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.9□□□□□ -0.18
CD28P10747 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.9□□□□□ -0.18
CD28P10747 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.9□□□□□ -0.18
CD28P10747 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.9□□□□□ -0.18
CD28P10747 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.9□□□□□ -0.18
CD28P10747 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.9□□□□□ -0.18
CD28P10747 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.9□□□□□ -0.18
CD28P10747 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD28P10747 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.9□□□□□ -0.18
CD28P10747 AC006538.3-201ENST00000612495 578 ntBASIC13.9□□□□□ -0.18
CD28P10747 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD28P10747 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD28P10747 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD28P10747 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD28P10747 NFIC-211ENST00000641145 8399 ntBASIC13.9□□□□□ -0.18
CD28P10747 AL031598.1-201ENST00000561511 1773 ntBASIC13.9□□□□□ -0.18
CD28P10747 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CD28P10747 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD28P10747 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD28P10747 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CD28P10747 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD28P10747 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CD28P10747 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CD28P10747 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CD28P10747 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.9□□□□□ -0.18
CD28P10747 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.9□□□□□ -0.19
CD28P10747 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CD28P10747 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
CD28P10747 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.9□□□□□ -0.19
CD28P10747 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD28P10747 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD28P10747 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD28P10747 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD28P10747 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD28P10747 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD28P10747 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.89□□□□□ -0.19
CD28P10747 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD28P10747 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CD28P10747 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD28P10747 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CD28P10747 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD28P10747 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD28P10747 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD28P10747 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.89□□□□□ -0.19
CD28P10747 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.89□□□□□ -0.19
CD28P10747 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.89□□□□□ -0.19
CD28P10747 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CD28P10747 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD28P10747 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.89□□□□□ -0.19
CD28P10747 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD28P10747 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CD28P10747 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CD28P10747 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms